Cow genome map

Conread name: Ss1.1-rspc033_l13.5

Conread position: 1-434
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 23

Conread position: 7-383
Cow position:
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 161

Conread position: 7-450
Cow position:
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 360

Conread position: 7-485
Cow position:
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 7-601
Cow position:
Alignm length: 634
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 16

Conread position: 7-642
Cow position:
Alignm length: 678
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 353

Conread position: 12-378
Cow position:
Alignm length: 395
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 116

Conread position: 12-643
Cow position:
Alignm length: 697
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 370

Conread position: 16-573
Cow position:
Alignm length: 582
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 8

Conread position: 16-601
Cow position:
Alignm length: 622
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 28

Conread position: 16-601
Cow position:
Alignm length: 630
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 254

Conread position: 16-608
Cow position:
Alignm length: 631
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 193

Conread position: 16-638
Cow position:
Alignm length: 656
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 143

Conread position: 16-642
Cow position:
Alignm length: 657
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 8

Conread position: 16-643
Cow position:
Alignm length: 673
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 16-643
Cow position:
Alignm length: 668
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 167

Conread position: 17-269
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 17-276
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 269

Conread position: 17-392
Cow position:
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 319

Conread position: 17-643
Cow position:
Alignm length: 688
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 351

Conread position: 17-643
Cow position:
Alignm length: 670
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 7

Conread position: 17-644
Cow position:
Alignm length: 662
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 349

Conread position: 18-601
Cow position:
Alignm length: 621
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 371

Conread position: 18-642
Cow position:
Alignm length: 678
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 276

Conread position: 18-643
Cow position:
Alignm length: 670
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 345

Conread position: 41-586
Cow position:
Alignm length: 574
Alignm identity: 374
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 11

Conread position: 41-586
Cow position:
Alignm length: 574
Alignm identity: 372
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 73, 13

Conread position: 46-632
Cow position:
Alignm length: 617
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 14

Conread position: 64-371
Cow position:
Alignm length: 319
Alignm identity: 216
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 67

Conread position: 65-642
Cow position:
Alignm length: 622
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 294

Conread position: 67-421
Cow position:
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 75

Conread position: 67-643
Cow position:
Alignm length: 617
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 286

Conread position: 69-418
Cow position:
Alignm length: 370
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 69-501
Cow position:
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 293

Conread position: 69-601
Cow position:
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 24

Conread position: 69-632
Cow position:
Alignm length: 611
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 321

Conread position: 69-642
Cow position:
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 303

Conread position: 70-514
Cow position:
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 220

Conread position: 70-538
Cow position:
Alignm length: 485
Alignm identity: 319
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 42

Conread position: 70-580
Cow position:
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 289

Conread position: 70-601
Cow position:
Alignm length: 558
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 276

Conread position: 70-642
Cow position:
Alignm length: 607
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 236

Conread position: 72-319
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 74, 129

Conread position: 73-260
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 73-338
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 81

Conread position: 73-446
Cow position:
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 313

Conread position: 73-477
Cow position:
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 306

Conread position: 73-482
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 266

Conread position: 73-510
Cow position:
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 147

Conread position: 73-562
Cow position:
Alignm length: 518
Alignm identity: 344
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 46

Conread position: 73-577
Cow position:
Alignm length: 543
Alignm identity: 349
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 32

Conread position: 73-588
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 73-601
Cow position:
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 208

Conread position: 73-601
Cow position:
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 283

Conread position: 73-601
Cow position:
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 86

Conread position: 73-601
Cow position:
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 182

Conread position: 73-603
Cow position:
Alignm length: 554
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 73-603
Cow position:
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 186

Conread position: 73-604
Cow position:
Alignm length: 550
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 73-635
Cow position:
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 92

Conread position: 73-638
Cow position:
Alignm length: 620
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 296

Conread position: 73-642
Cow position:
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 275

Conread position: 73-642
Cow position:
Alignm length: 610
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 73-642
Cow position:
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 297

Conread position: 73-642
Cow position:
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 184

Conread position: 73-643
Cow position:
Alignm length: 625
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 221

Conread position: 73-643
Cow position:
Alignm length: 621
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 43

Conread position: 73-643
Cow position:
Alignm length: 614
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 288

Conread position: 74-504
Cow position:
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 74-586
Cow position:
Alignm length: 536
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 242

Conread position: 74-636
Cow position:
Alignm length: 597
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 74-642
Cow position:
Alignm length: 615
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 285

Conread position: 74-643
Cow position:
Alignm length: 608
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 218

Conread position: 77-337
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 99, 16

Conread position: 77-581
Cow position:
Alignm length: 539
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 303

Conread position: 77-601
Cow position:
Alignm length: 537
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 177

Conread position: 77-601
Cow position:
Alignm length: 555
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 47

Conread position: 77-606
Cow position:
Alignm length: 547
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 63

Conread position: 77-607
Cow position:
Alignm length: 551
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 22

Conread position: 77-642
Cow position:
Alignm length: 612
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 16

Conread position: 80-468
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 207

Conread position: 89-554
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 166

Conread position: 97-601
Cow position:
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 103-642
Cow position:
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 247

Conread position: 107-601
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 110-601
Cow position:
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 254

Conread position: 118-601
Cow position:
Alignm length: 528
Alignm identity: 353
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 284

Conread position: 126-513
Cow position:
Alignm length: 404
Alignm identity: 261
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 90

Conread position: 131-595
Cow position:
Alignm length: 480
Alignm identity: 298
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 19

Conread position: 142-333
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 157-392
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 189

Conread position: 158-600
Cow position:
Alignm length: 452
Alignm identity: 293
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 61

Conread position: 161-422
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 181

Conread position: 161-472
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 48

Conread position: 161-601
Cow position:
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 145

Conread position: 161-601
Cow position:
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 161-601
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 81

Conread position: 163-478
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 129

Conread position: 171-601
Cow position:
Alignm length: 435
Alignm identity: 273
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 96

Conread position: 194-602
Cow position:
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 197-600
Cow position:
Alignm length: 416
Alignm identity: 263
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 22

Conread position: 198-601
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 19

Conread position: 198-601
Cow position:
Alignm length: 415
Alignm identity: 278
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 11

Conread position: 212-446
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 9

Conread position: 216-602
Cow position:
Alignm length: 404
Alignm identity: 268
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 125, 24

Conread position: 216-642
Cow position:
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 231-614
Cow position:
Alignm length: 395
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 159

Conread position: 241-553
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 11, 117

Conread position: 257-601
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 159, 82

Conread position: 259-608
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 83

Conread position: 262-643
Cow position:
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 264-600
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 75

Conread position: 266-571
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 73

Conread position: 274-626
Cow position:
Alignm length: 364
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 142, 73

Conread position: 277-601
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 62

Conread position: 281-643
Cow position:
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 67

Conread position: 299-643
Cow position:
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 43

Conread position: 330-586
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 32

Conread position: 348-601
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 54

Conread position: 360-626
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 60, 29

Conread position: 360-642
Cow position:
Alignm length: 303
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 361-602
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 59

Conread position: 390-564
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 93

Conread position: 400-602
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 5

Conread position: 415-601
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 120

Conread position: 419-601
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 134

Conread position: 432-603
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 112

Conread position: 440-643
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 449-644
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 94

Conread position: 458-604
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 458-643
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 459-644
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 192

Show alignments to all cow chromosomes.