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Cow genome map

           
Conread name:
           
Ss1.1-rspc033_l13.5
        

               
Conread position:
               
3-381
               

               
Cow position:
               
chr15:7235005-7235399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
6-601
               

               
Cow position:
               
chr15:21914740-21915379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 305
               

               
Conread position:
               
6-643
               

               
Cow position:
               
chr15:5981098-5981788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr15:38981475-38981887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
7-569
               

               
Cow position:
               
chr15:51675464-51676066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
7-601
               

               
Cow position:
               
chr15:32711972-32712614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 258
               

               
Conread position:
               
7-602
               

               
Cow position:
               
chr15:35736541-35737173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
7-603
               

               
Cow position:
               
chr15:4915940-4916552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
8-602
               

               
Cow position:
               
chr15:53313490-53314076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
8-643
               

               
Cow position:
               
chr15:14581615-14580929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 261
               

               
Conread position:
               
12-601
               

               
Cow position:
               
chr15:24295838-24296464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 348
               

               
Conread position:
               
16-166
               

               
Cow position:
               
chr15:36392385-36392234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
16-375
               

               
Cow position:
               
chr15:6067421-6067048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
16-566
               

               
Cow position:
               
chr15:4679015-4679619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 519
               

               
Conread position:
               
16-594
               

               
Cow position:
               
chr15:2013322-2013932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
16-601
               

               
Cow position:
               
chr15:4927130-4927758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 332
               

               
Conread position:
               
16-601
               

               
Cow position:
               
chr15:8100225-8100828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 246
               

               
Conread position:
               
16-601
               

               
Cow position:
               
chr15:28489387-28488777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 278
               

               
Conread position:
               
16-601
               

               
Cow position:
               
chr15:53409672-53410284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
16-639
               

               
Cow position:
               
chr15:36668506-36669121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
16-642
               

               
Cow position:
               
chr15:17293806-17294479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
16-643
               

               
Cow position:
               
chr15:35752562-35751875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 363
               

               
Conread position:
               
17-601
               

               
Cow position:
               
chr15:2926066-2926668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 349
               

               
Conread position:
               
17-601
               

               
Cow position:
               
chr15:3260561-3259944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
17-601
               

               
Cow position:
               
chr15:15346354-15345731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
17-631
               

               
Cow position:
               
chr15:4922903-4923563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
17-642
               

               
Cow position:
               
chr15:4765943-4766622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 351
               

               
Conread position:
               
17-642
               

               
Cow position:
               
chr15:18577470-18578144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 351
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr15:2077416-2078079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr15:18332071-18331403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 294
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr15:19737297-19736625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr15:35646919-35646253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr15:41357928-41358327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
18-489
               

               
Cow position:
               
chr15:1318205-1318669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
18-561
               

               
Cow position:
               
chr15:13677292-13677821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
18-585
               

               
Cow position:
               
chr15:7261367-7261962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 361
               

               
Conread position:
               
18-586
               

               
Cow position:
               
chr15:7965188-7964586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
18-643
               

               
Cow position:
               
chr15:31359638-31360297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 269
               

               
Conread position:
               
19-601
               

               
Cow position:
               
chr15:4813360-4813967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
19-643
               

               
Cow position:
               
chr15:21664983-21664312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 258
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr15:6368046-6367617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 360
               

               
Conread position:
               
22-601
               

               
Cow position:
               
chr15:4823242-4823809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
36-643
               

               
Cow position:
               
chr15:2901479-2900830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
64-568
               

               
Cow position:
               
chr15:42530725-42531256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
65-614
               

               
Cow position:
               
chr15:4672254-4672823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
67-588
               

               
Cow position:
               
chr15:329145-329697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
69-320
               

               
Cow position:
               
chr15:4950886-4951146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
69-387
               

               
Cow position:
               
chr15:50056848-50057175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
76, 287
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr15:20750209-20750545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 272
               

               
Conread position:
               
69-499
               

               
Cow position:
               
chr15:29866904-29866450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 290
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr15:1773317-1773773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 293
               

               
Conread position:
               
69-544
               

               
Cow position:
               
chr15:44071407-44071918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 305
               

               
Conread position:
               
69-556
               

               
Cow position:
               
chr15:6079571-6080075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
69-567
               

               
Cow position:
               
chr15:3009024-3008501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
69-599
               

               
Cow position:
               
chr15:11293616-11293069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 160
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr15:2646836-2646276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 290
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr15:3182247-3181689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr15:4197281-4197844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
69-612
               

               
Cow position:
               
chr15:2763621-2764185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 166
               

               
Conread position:
               
69-637
               

               
Cow position:
               
chr15:12454051-12454624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 232
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr15:7550962-7551470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 276
               

               
Conread position:
               
70-643
               

               
Cow position:
               
chr15:53299291-53299886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
71-334
               

               
Cow position:
               
chr15:36625441-36625182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
72-504
               

               
Cow position:
               
chr15:1851615-1851193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
72-601
               

               
Cow position:
               
chr15:9430761-9431314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
72-601
               

               
Cow position:
               
chr15:17217306-17216776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr15:445437-445693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr15:51715737-51716056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
73-385
               

               
Cow position:
               
chr15:1783059-1783390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 287
               

               
Conread position:
               
73-427
               

               
Cow position:
               
chr15:50253649-50254017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 275
               

               
Conread position:
               
73-482
               

               
Cow position:
               
chr15:1299736-1299296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr15:6552999-6552556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
73-560
               

               
Cow position:
               
chr15:7892508-7892011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
73-564
               

               
Cow position:
               
chr15:11626509-11626995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
142, 60
               

               
Conread position:
               
73-600
               

               
Cow position:
               
chr15:5010813-5010256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 288
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr15:580253-580792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr15:4962458-4962991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr15:17148945-17149488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 185
               

               
Conread position:
               
73-608
               

               
Cow position:
               
chr15:25654251-25653675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 288
               

               
Conread position:
               
73-632
               

               
Cow position:
               
chr15:8751226-8751807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr15:9912407-9911806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 279
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr15:4386575-4387187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr15:24794646-24795248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 251
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr15:50123111-50122508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 186
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr15:7838084-7838699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 298
               

               
Conread position:
               
74-557
               

               
Cow position:
               
chr15:50147899-50148419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 288
               

               
Conread position:
               
74-569
               

               
Cow position:
               
chr15:32479775-32479252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
90, 187
               

               
Conread position:
               
74-613
               

               
Cow position:
               
chr15:31846297-31846835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
74-643
               

               
Cow position:
               
chr15:32493051-32492453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
75-423
               

               
Cow position:
               
chr15:31860394-31860008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 319
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr15:611475-611029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
76-573
               

               
Cow position:
               
chr15:25319479-25318992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
77-485
               

               
Cow position:
               
chr15:6485407-6485833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
77-580
               

               
Cow position:
               
chr15:4652200-4652729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
78-642
               

               
Cow position:
               
chr15:2588624-2588017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
79-642
               

               
Cow position:
               
chr15:58484-59082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
80-600
               

               
Cow position:
               
chr15:41956675-41957183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
85-642
               

               
Cow position:
               
chr15:7563826-7564428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 274
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr15:7938284-7938561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
87-594
               

               
Cow position:
               
chr15:24718177-24718694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
87-602
               

               
Cow position:
               
chr15:16287111-16286570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
88-601
               

               
Cow position:
               
chr15:21450517-21451072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 227
               

               
Conread position:
               
88-643
               

               
Cow position:
               
chr15:4686564-4687160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
89-601
               

               
Cow position:
               
chr15:18266938-18266388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 266
               

               
Conread position:
               
96-601
               

               
Cow position:
               
chr15:13074872-13075373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
97-603
               

               
Cow position:
               
chr15:7545691-7546252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 296
               

               
Conread position:
               
102-608
               

               
Cow position:
               
chr15:4108451-4107923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
108-643
               

               
Cow position:
               
chr15:20411452-20412026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 249
               

               
Conread position:
               
142-601
               

               
Cow position:
               
chr15:2412549-2412082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
144-643
               

               
Cow position:
               
chr15:17036770-17036227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 217
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr15:1238601-1238958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr15:20361172-20360820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
158-644
               

               
Cow position:
               
chr15:4726123-4726633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
162-614
               

               
Cow position:
               
chr15:9003286-9002832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
163-423
               

               
Cow position:
               
chr15:6625937-6626194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 181
               

               
Conread position:
               
164-638
               

               
Cow position:
               
chr15:51218643-51219149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
165-642
               

               
Cow position:
               
chr15:3889852-3890334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr15:21964919-21965259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
171-643
               

               
Cow position:
               
chr15:6154999-6154497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
172-600
               

               
Cow position:
               
chr15:8058900-8059344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
181-599
               

               
Cow position:
               
chr15:32067667-32067234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
185-601
               

               
Cow position:
               
chr15:6591171-6590738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
186-474
               

               
Cow position:
               
chr15:22240044-22239747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr15:523876-523615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 180
               

               
Conread position:
               
188-440
               

               
Cow position:
               
chr15:49520498-49520248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
189-601
               

               
Cow position:
               
chr15:1765269-1765693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
197-601
               

               
Cow position:
               
chr15:20355631-20355221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
199-563
               

               
Cow position:
               
chr15:500140-500510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
200-599
               

               
Cow position:
               
chr15:6279445-6279849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
202-599
               

               
Cow position:
               
chr15:6383183-6382786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 29
               

               
Conread position:
               
209-587
               

               
Cow position:
               
chr15:44302120-44301743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
215-602
               

               
Cow position:
               
chr15:7929556-7929947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
216-514
               

               
Cow position:
               
chr15:22529770-22529473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
216-579
               

               
Cow position:
               
chr15:24288489-24288120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
216-581
               

               
Cow position:
               
chr15:4141756-4141380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
216-601
               

               
Cow position:
               
chr15:33122356-33122755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
216-638
               

               
Cow position:
               
chr15:53339202-53339648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
222-645
               

               
Cow position:
               
chr15:17077574-17077133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
224-601
               

               
Cow position:
               
chr15:35898790-35898399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
232-642
               

               
Cow position:
               
chr15:6561584-6562017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 19
               

               
Conread position:
               
241-601
               

               
Cow position:
               
chr15:51613129-51613514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
241-642
               

               
Cow position:
               
chr15:107007-107431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
241-642
               

               
Cow position:
               
chr15:41659174-41659598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
244-599
               

               
Cow position:
               
chr15:10478516-10478151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
253-564
               

               
Cow position:
               
chr15:12419920-12419621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
256-577
               

               
Cow position:
               
chr15:8410128-8410446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
256-642
               

               
Cow position:
               
chr15:25205983-25205576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
256-642
               

               
Cow position:
               
chr15:32719640-32719250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
259-579
               

               
Cow position:
               
chr15:7783406-7783102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
277-601
               

               
Cow position:
               
chr15:1833597-1833262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
281-601
               

               
Cow position:
               
chr15:1767887-1768205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
285-574
               

               
Cow position:
               
chr15:1830534-1830251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
293-602
               

               
Cow position:
               
chr15:6114648-6114966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
300-555
               

               
Cow position:
               
chr15:4951162-4951431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
304-646
               

               
Cow position:
               
chr15:6613790-6614153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
307-599
               

               
Cow position:
               
chr15:41219938-41219650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
320-581
               

               
Cow position:
               
chr15:50869423-50869695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
325-601
               

               
Cow position:
               
chr15:36624759-36624480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
328-602
               

               
Cow position:
               
chr15:9737828-9737548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
341-601
               

               
Cow position:
               
chr15:368543-368276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
342-504
               

               
Cow position:
               
chr15:1879139-1878974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
343-601
               

               
Cow position:
               
chr15:8698820-8698557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
169, 17
               

               
Conread position:
               
350-642
               

               
Cow position:
               
chr15:7939551-7939864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 195
               

               
Conread position:
               
351-601
               

               
Cow position:
               
chr15:7235442-7235703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
355-601
               

               
Cow position:
               
chr15:13390204-13389947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
366-642
               

               
Cow position:
               
chr15:12364571-12364857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
398-643
               

               
Cow position:
               
chr15:6329222-6329471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
419-600
               

               
Cow position:
               
chr15:6552593-6552404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
419-643
               

               
Cow position:
               
chr15:8811116-8810887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 120
               

               
Conread position:
               
428-643
               

               
Cow position:
               
chr15:31859759-31859526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
429-569
               

               
Cow position:
               
chr15:51716618-51716765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
429-601
               

               
Cow position:
               
chr15:32695363-32695536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
430-601
               

               
Cow position:
               
chr15:4081036-4080858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
433-599
               

               
Cow position:
               
chr15:1783533-1783706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
433-603
               

               
Cow position:
               
chr15:29970112-29969943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
440-633
               

               
Cow position:
               
chr15:19395749-19395544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 183
               

               
Conread position:
               
459-638
               

               
Cow position:
               
chr15:42685-42877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 106
               
Show alignments to all cow chromosomes.