Cow genome map
| Conread name: | Ss1.1-rspc033_l13.5 |
| Conread position: | 1-603 |
| Cow position: | chr16:6716195-6715575 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 405 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 164 |
| Conread position: | 7-601 |
| Cow position: | chr16:25086021-25086646 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 304 |
| Conread position: | 7-641 |
| Cow position: | chr16:43896870-43896176 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 369 |
| Conread position: | 12-601 |
| Cow position: | chr16:5890406-5891031 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 12-643 |
| Cow position: | chr16:25457064-25456393 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 15-637 |
| Cow position: | chr16:49221465-49220836 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 16-251 |
| Cow position: | chr16:42735978-42735732 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 16-260 |
| Cow position: | chr16:56916654-56916386 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 16-292 |
| Cow position: | chr16:49234218-49233918 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 16-372 |
| Cow position: | chr16:26105648-26105256 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 361 |
| Conread position: | 16-392 |
| Cow position: | chr16:15477254-15477656 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 16-434 |
| Cow position: | chr16:17056557-17056114 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 16-478 |
| Cow position: | chr16:406626-406132 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 350 |
| Conread position: | 16-485 |
| Cow position: | chr16:41166232-41165760 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 16-504 |
| Cow position: | chr16:49255807-49255302 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 16-601 |
| Cow position: | chr16:18497871-18497281 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 16-635 |
| Cow position: | chr16:26978553-26979182 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 16-642 |
| Cow position: | chr16:51084574-51085244 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 17-423 |
| Cow position: | chr16:23252023-23251577 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 360 |
| Conread position: | 17-601 |
| Cow position: | chr16:15185486-15186113 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 373 |
| Conread position: | 17-608 |
| Cow position: | chr16:12537513-12536910 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 24 |
| Conread position: | 17-643 |
| Cow position: | chr16:1432605-1433272 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 17-643 |
| Cow position: | chr16:1567038-1566376 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 346 |
| Conread position: | 17-643 |
| Cow position: | chr16:7676043-7675370 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 355 |
| Conread position: | 17-643 |
| Cow position: | chr16:8815690-8815020 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 306 |
| Conread position: | 17-643 |
| Cow position: | chr16:23983710-23984390 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 351 |
| Conread position: | 17-643 |
| Cow position: | chr16:25442045-25442717 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 17-643 |
| Cow position: | chr16:26664167-26664814 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 349 |
| Conread position: | 17-643 |
| Cow position: | chr16:40295760-40295079 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 344 |
| Conread position: | 17-643 |
| Cow position: | chr16:54324921-54324241 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 347 |
| Conread position: | 17-644 |
| Cow position: | chr16:837734-838400 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 345 |
| Conread position: | 17-644 |
| Cow position: | chr16:23535476-23534812 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 245 |
| Conread position: | 17-644 |
| Cow position: | chr16:29047437-29048111 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 18-233 |
| Cow position: | chr16:29984500-29984729 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 18-601 |
| Cow position: | chr16:27732965-27732347 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 18-642 |
| Cow position: | chr16:3088786-3088116 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 303 |
| Conread position: | 18-643 |
| Cow position: | chr16:10438667-10439346 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 299 |
| Conread position: | 20-431 |
| Cow position: | chr16:23808751-23809173 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 173 |
| Conread position: | 21-418 |
| Cow position: | chr16:51038506-51038905 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 21-565 |
| Cow position: | chr16:2482718-2482137 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 295 |
| Conread position: | 43-642 |
| Cow position: | chr16:2238305-2237683 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 56-601 |
| Cow position: | chr16:51403430-51402841 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 335 |
| Conread position: | 67-336 |
| Cow position: | chr16:3828799-3828529 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 67-552 |
| Cow position: | chr16:25001826-25001308 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 149 |
| Conread position: | 67-606 |
| Cow position: | chr16:9209436-9209977 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 372 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 67-643 |
| Cow position: | chr16:25258297-25258890 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 237 |
| Conread position: | 68-643 |
| Cow position: | chr16:28470600-28469974 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 291 |
| Conread position: | 69-340 |
| Cow position: | chr16:11284067-11284358 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 211 |
| Conread position: | 69-340 |
| Cow position: | chr16:21186090-21186381 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 69-370 |
| Cow position: | chr16:27714336-27714033 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 184 |
| Conread position: | 69-375 |
| Cow position: | chr16:25189123-25189440 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 74, 189 |
| Conread position: | 69-595 |
| Cow position: | chr16:16270659-16270107 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 246 |
| Conread position: | 69-601 |
| Cow position: | chr16:19779176-19778617 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 69-642 |
| Cow position: | chr16:27593982-27594595 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 289 |
| Conread position: | 72-601 |
| Cow position: | chr16:47474736-47475278 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 193 |
| Conread position: | 73-320 |
| Cow position: | chr16:54727063-54727318 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 73-381 |
| Cow position: | chr16:37455522-37455209 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 73-443 |
| Cow position: | chr16:4478491-4478097 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 179 |
| Conread position: | 73-452 |
| Cow position: | chr16:31591437-31591040 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 256 |
| Conread position: | 73-514 |
| Cow position: | chr16:28436997-28436520 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 73-561 |
| Cow position: | chr16:16897937-16898448 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 73-575 |
| Cow position: | chr16:39824414-39824930 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 73-599 |
| Cow position: | chr16:48334091-48333561 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 220 |
| Conread position: | 73-601 |
| Cow position: | chr16:5485210-5485758 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 283 |
| Conread position: | 73-601 |
| Cow position: | chr16:14665330-14664778 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 238 |
| Conread position: | 73-601 |
| Cow position: | chr16:23671176-23671743 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 291 |
| Conread position: | 73-601 |
| Cow position: | chr16:23801632-23801109 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 350 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 73-601 |
| Cow position: | chr16:34530782-34531322 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 73-603 |
| Cow position: | chr16:20202473-20203012 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 73-608 |
| Cow position: | chr16:28196766-28196199 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 199 |
| Conread position: | 73-614 |
| Cow position: | chr16:3330417-3330977 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 281 |
| Conread position: | 73-643 |
| Cow position: | chr16:15567735-15568345 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 242 |
| Conread position: | 73-643 |
| Cow position: | chr16:16228823-16229394 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 50 |
| Conread position: | 74-357 |
| Cow position: | chr16:19638541-19638833 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 242 |
| Conread position: | 74-493 |
| Cow position: | chr16:25171827-25172245 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 75-504 |
| Cow position: | chr16:10565297-10564852 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 77-375 |
| Cow position: | chr16:38023806-38024119 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 77-601 |
| Cow position: | chr16:33011-33566 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 202 |
| Conread position: | 77-601 |
| Cow position: | chr16:12668297-12667744 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 282 |
| Conread position: | 77-601 |
| Cow position: | chr16:27823742-27823215 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 104, 190 |
| Conread position: | 77-603 |
| Cow position: | chr16:10375116-10374565 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 284 |
| Conread position: | 77-642 |
| Cow position: | chr16:28169870-28169234 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 84-601 |
| Cow position: | chr16:41762328-41762853 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 85-586 |
| Cow position: | chr16:4367598-4368105 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 85-608 |
| Cow position: | chr16:5662326-5662881 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 274 |
| Conread position: | 89-601 |
| Cow position: | chr16:40557452-40556900 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 172 |
| Conread position: | 89-602 |
| Cow position: | chr16:27299635-27299114 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 354 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 107 |
| Conread position: | 90-422 |
| Cow position: | chr16:19080462-19080816 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 269 |
| Conread position: | 93-423 |
| Cow position: | chr16:37481920-37481583 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 151 |
| Conread position: | 104-549 |
| Cow position: | chr16:16520253-16519788 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 206 |
| Conread position: | 117-563 |
| Cow position: | chr16:9931266-9931729 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 187 |
| Conread position: | 118-614 |
| Cow position: | chr16:19150059-19149554 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 131-630 |
| Cow position: | chr16:30071968-30072471 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 134-335 |
| Cow position: | chr16:25933239-25933456 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 136-636 |
| Cow position: | chr16:32937068-32937591 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 215 |
| Conread position: | 144-411 |
| Cow position: | chr16:7464869-7465152 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 209 |
| Conread position: | 157-326 |
| Cow position: | chr16:7670268-7670433 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 157-642 |
| Cow position: | chr16:1960036-1959538 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 161-635 |
| Cow position: | chr16:41685669-41685188 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 187 |
| Conread position: | 162-601 |
| Cow position: | chr16:41571972-41572434 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 308 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 66, 189 |
| Conread position: | 163-601 |
| Cow position: | chr16:10967492-10967067 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 164-500 |
| Cow position: | chr16:49472230-49472566 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 169, 74 |
| Conread position: | 164-643 |
| Cow position: | chr16:2726633-2726127 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 165-643 |
| Cow position: | chr16:2410354-2409846 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 206 |
| Conread position: | 167-626 |
| Cow position: | chr16:5871476-5871953 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 170-564 |
| Cow position: | chr16:44669788-44669400 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 171-413 |
| Cow position: | chr16:39366323-39366082 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 177-576 |
| Cow position: | chr16:28158152-28158577 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 181-601 |
| Cow position: | chr16:5527789-5527351 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 175 |
| Conread position: | 181-614 |
| Cow position: | chr16:1860828-1861283 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 186-643 |
| Cow position: | chr16:37480255-37479768 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 180 |
| Conread position: | 187-641 |
| Cow position: | chr16:25342574-25343056 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 188-601 |
| Cow position: | chr16:29971164-29971593 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 161 |
| Conread position: | 194-601 |
| Cow position: | chr16:46500817-46501235 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 215-601 |
| Cow position: | chr16:43648754-43649137 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 216-600 |
| Cow position: | chr16:24764924-24764521 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 216-601 |
| Cow position: | chr16:337822-338220 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 216-601 |
| Cow position: | chr16:49385670-49386065 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 223-557 |
| Cow position: | chr16:4301552-4301203 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 174, 16 |
| Conread position: | 223-580 |
| Cow position: | chr16:27005698-27006045 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 244-601 |
| Cow position: | chr16:18618450-18618094 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 259-575 |
| Cow position: | chr16:49233799-49233482 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 83 |
| Conread position: | 260-482 |
| Cow position: | chr16:19664082-19663864 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 266-601 |
| Cow position: | chr16:47627959-47627615 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 274-644 |
| Cow position: | chr16:18667084-18667460 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 69 |
| Conread position: | 275-637 |
| Cow position: | chr16:12245628-12245270 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 231, 16 |
| Conread position: | 298-504 |
| Cow position: | chr16:29984739-29984950 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 299-642 |
| Cow position: | chr16:16240566-16240206 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 328-643 |
| Cow position: | chr16:23809110-23809438 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 20 |
| Conread position: | 330-642 |
| Cow position: | chr16:39366117-39365805 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 339-536 |
| Cow position: | chr16:29034704-29034908 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 349-642 |
| Cow position: | chr16:5119249-5118931 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 356-602 |
| Cow position: | chr16:25933968-25934222 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 396-596 |
| Cow position: | chr16:42735759-42735556 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 12, 168 |
| Conread position: | 396-601 |
| Cow position: | chr16:27712362-27712151 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 410-642 |
| Cow position: | chr16:20193335-20193084 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 410-642 |
| Cow position: | chr16:23251133-23250894 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 194 |
| Conread position: | 420-598 |
| Cow position: | chr16:25740108-25740287 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 172 |
| Conread position: | 420-643 |
| Cow position: | chr16:4474760-4474514 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 426-642 |
| Cow position: | chr16:7465457-7465691 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 432-601 |
| Cow position: | chr16:3828481-3828307 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 434-631 |
| Cow position: | chr16:44899791-44899589 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 169, 71 |
Show alignments to all cow chromosomes.