Cow genome map
| Conread name: | Ss1.1-rspc033_l13.5 |
| Conread position: | 7-643 |
| Cow position: | chr18:33270134-33270769 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 12-603 |
| Cow position: | chr18:54271671-54272267 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 15-602 |
| Cow position: | chr18:29238092-29238704 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 16-434 |
| Cow position: | chr18:52652104-52652555 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 372 |
| Conread position: | 16-474 |
| Cow position: | chr18:27837115-27836622 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 179 |
| Conread position: | 16-578 |
| Cow position: | chr18:12237421-12237969 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 16-600 |
| Cow position: | chr18:28972690-28972070 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 347 |
| Conread position: | 16-601 |
| Cow position: | chr18:54004977-54004359 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 348 |
| Conread position: | 17-601 |
| Cow position: | chr18:16089332-16089937 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 17-643 |
| Cow position: | chr18:14131589-14132260 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 349 |
| Conread position: | 17-643 |
| Cow position: | chr18:14417175-14417839 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 237 |
| Conread position: | 17-643 |
| Cow position: | chr18:16175420-16174750 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 17-643 |
| Cow position: | chr18:25352452-25353132 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 355 |
| Conread position: | 17-643 |
| Cow position: | chr18:37507153-37507833 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 373 |
| Conread position: | 18-642 |
| Cow position: | chr18:37663542-37664162 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 18-643 |
| Cow position: | chr18:23798846-23799514 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 347 |
| Conread position: | 19-643 |
| Cow position: | chr18:27988399-27989056 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 26-604 |
| Cow position: | chr18:15856432-15857015 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 312 |
| Conread position: | 65-584 |
| Cow position: | chr18:16392829-16392312 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 66-599 |
| Cow position: | chr18:159970-159430 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 356 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 67-418 |
| Cow position: | chr18:40345149-40344776 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 69-320 |
| Cow position: | chr18:29074244-29074496 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 69-601 |
| Cow position: | chr18:32769007-32769539 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 105 |
| Conread position: | 70-344 |
| Cow position: | chr18:51614393-51614100 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 70-632 |
| Cow position: | chr18:47742760-47743350 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 309 |
| Conread position: | 72-498 |
| Cow position: | chr18:54022871-54022425 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 280 |
| Conread position: | 73-354 |
| Cow position: | chr18:16137589-16137297 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 73-392 |
| Cow position: | chr18:40479654-40479986 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 243 |
| Conread position: | 73-406 |
| Cow position: | chr18:33300574-33300907 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 73-414 |
| Cow position: | chr18:11273856-11273495 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 171 |
| Conread position: | 73-442 |
| Cow position: | chr18:16079931-16080319 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 287 |
| Conread position: | 73-504 |
| Cow position: | chr18:38343032-38342591 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 283 |
| Conread position: | 73-529 |
| Cow position: | chr18:56013838-56014320 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 336 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 51, 141 |
| Conread position: | 73-600 |
| Cow position: | chr18:19353623-19354183 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 290 |
| Conread position: | 73-601 |
| Cow position: | chr18:46867640-46867098 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 371 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 73-601 |
| Cow position: | chr18:46876071-46875553 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 361 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 73-601 |
| Cow position: | chr18:51461792-51461233 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 288 |
| Conread position: | 73-601 |
| Cow position: | chr18:51482130-51482671 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 73-601 |
| Cow position: | chr18:54170250-54169706 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 307 |
| Conread position: | 73-642 |
| Cow position: | chr18:51342947-51343553 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 73-643 |
| Cow position: | chr18:29865350-29864741 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 261 |
| Conread position: | 75-341 |
| Cow position: | chr18:18851640-18851916 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 111 |
| Conread position: | 75-523 |
| Cow position: | chr18:20692912-20692444 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 147 |
| Conread position: | 77-338 |
| Cow position: | chr18:21096448-21096703 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 78-375 |
| Cow position: | chr18:29407177-29406872 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 88-600 |
| Cow position: | chr18:25364479-25364982 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 92-344 |
| Cow position: | chr18:25921252-25921528 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 41, 228 |
| Conread position: | 96-643 |
| Cow position: | chr18:36509897-36510487 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 263 |
| Conread position: | 105-601 |
| Cow position: | chr18:51694992-51695520 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 122-457 |
| Cow position: | chr18:29046640-29046290 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 220 |
| Conread position: | 123-596 |
| Cow position: | chr18:35799594-35799114 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 128-601 |
| Cow position: | chr18:35054460-35054941 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 142-504 |
| Cow position: | chr18:34043949-34044309 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 142-563 |
| Cow position: | chr18:26245288-26244843 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 212 |
| Conread position: | 143-601 |
| Cow position: | chr18:20235028-20234571 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 146-573 |
| Cow position: | chr18:33752056-33752485 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 146-642 |
| Cow position: | chr18:4947311-4947817 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 161-426 |
| Cow position: | chr18:17672444-17672170 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 163-332 |
| Cow position: | chr18:51271594-51271430 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 164-465 |
| Cow position: | chr18:6061443-6061142 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 167 |
| Conread position: | 164-504 |
| Cow position: | chr18:41839443-41839103 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 179-501 |
| Cow position: | chr18:8101028-8100723 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 239, 43 |
| Conread position: | 179-601 |
| Cow position: | chr18:51274699-51274258 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 305 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 179-638 |
| Cow position: | chr18:19485523-19486008 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 163 |
| Conread position: | 181-601 |
| Cow position: | chr18:14421664-14422093 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 182-601 |
| Cow position: | chr18:37490210-37490639 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 197-641 |
| Cow position: | chr18:15852060-15852508 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 190, 15 |
| Conread position: | 199-370 |
| Cow position: | chr18:20835055-20835225 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 203-628 |
| Cow position: | chr18:56485253-56484807 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 170 |
| Conread position: | 222-504 |
| Cow position: | chr18:36110687-36110401 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 223-504 |
| Cow position: | chr18:37157800-37157512 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 230-586 |
| Cow position: | chr18:48809570-48809926 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 243-601 |
| Cow position: | chr18:17962296-17961933 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 245-603 |
| Cow position: | chr18:5534460-5534825 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 94 |
| Conread position: | 256-600 |
| Cow position: | chr18:51593460-51593812 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 143 |
| Conread position: | 258-526 |
| Cow position: | chr18:2646059-2645798 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 153, 77 |
| Conread position: | 287-642 |
| Cow position: | chr18:24617629-24618003 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 306-601 |
| Cow position: | chr18:27538373-27538680 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 307-643 |
| Cow position: | chr18:25921907-25922261 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 385-642 |
| Cow position: | chr18:32166333-32166059 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 396-643 |
| Cow position: | chr18:40482599-40482866 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 404-642 |
| Cow position: | chr18:11273247-11272988 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 17, 162 |
| Conread position: | 405-601 |
| Cow position: | chr18:42516240-42516446 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 196 |
| Conread position: | 417-643 |
| Cow position: | chr18:40344743-40344525 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 420-632 |
| Cow position: | chr18:52654444-52654674 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 449-642 |
| Cow position: | chr18:23660843-23660631 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.