Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               1-601
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               1-638
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               6-601
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               7-446
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 316
               

               Conread position:
               7-601
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 365
               

               Conread position:
               8-643
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 161
               

               Conread position:
               16-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               16-282
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 239
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 366
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               16-642
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 354
               

               Conread position:
               17-392
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 213
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 131
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 223
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 338
               

               Conread position:
               18-482
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 148
               

               Conread position:
               24-643
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 103
               

               Conread position:
               27-392
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               68-642
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 112
               

               Conread position:
               69-375
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 50
               

               Conread position:
               69-396
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 290
               

               Conread position:
               69-423
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               69-637
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 192
               

               Conread position:
               69-643
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               69-643
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 16
               

               Conread position:
               69-643
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 254
               

               Conread position:
               70-375
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 271
               

               Conread position:
               70-551
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 221
               

               Conread position:
               73-504
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 276
               

               Conread position:
               73-561
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 211
               

               Conread position:
               73-564
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               340
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               94, 232
               

               Conread position:
               73-604
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               73-626
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               373
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 288
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 290
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 88
               

               Conread position:
               74-386
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 221
               

               Conread position:
               74-603
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 188
               

               Conread position:
               75-333
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               76-643
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 284
               

               Conread position:
               78-374
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               78-642
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               384
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               96-643
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 218
               

               Conread position:
               119-601
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 156
               

               Conread position:
               146-514
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               157-642
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 192
               

               Conread position:
               160-500
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               163-603
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 123
               

               Conread position:
               167-475
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               167-563
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               168-598
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               171-643
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               182-601
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               187-599
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               188-632
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               218-601
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               160, 98
               

               Conread position:
               244-598
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 33
               

               Conread position:
               249-563
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               127, 82
               

               Conread position:
               274-538
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 82
               

               Conread position:
               274-643
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 6
               

               Conread position:
               280-601
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 62
               

               Conread position:
               298-586
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               298-642
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               328-601
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               178, 27
               

               Conread position:
               358-601
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               379-642
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 200
               

               Conread position:
               388-600
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               396-643
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               414-603
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               421-601
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               429-642
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               443-601
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               464-643
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.