Cow genome map

Conread name: Ss1.1-rspc033_l13.5

Conread position: 2-601
Cow position: chr2:53540567-53541199 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 319

Conread position: 6-443
Cow position: chr2:40539121-40539575 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 122

Conread position: 7-597
Cow position: chr2:49628407-49629019 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 95

Conread position: 7-642
Cow position: chr2:25028661-25027988 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 168

Conread position: 8-643
Cow position: chr2:282061-281368 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 371

Conread position: 12-601
Cow position: chr2:32656288-32656899 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 321

Conread position: 12-642
Cow position: chr2:9189402-9188728 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 326

Conread position: 12-644
Cow position: chr2:50078224-50078876 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 16-374
Cow position: chr2:31298431-31298813 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 289

Conread position: 16-472
Cow position: chr2:1691617-1692090 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 31

Conread position: 16-477
Cow position: chr2:44990659-44990167 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 16-482
Cow position: chr2:387140-386646 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 324
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 350

Conread position: 16-514
Cow position: chr2:6976311-6975806 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 323
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 21

Conread position: 16-564
Cow position: chr2:45916189-45915615 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 100

Conread position: 16-564
Cow position: chr2:45967375-45966815 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 16-601
Cow position: chr2:174919-174302 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 16-601
Cow position: chr2:15576198-15575582 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 95

Conread position: 16-601
Cow position: chr2:32434678-32434065 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 359

Conread position: 16-614
Cow position: chr2:16074885-16074262 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 16-643
Cow position: chr2:41687410-41688085 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 352

Conread position: 16-643
Cow position: chr2:44934334-44933678 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 339

Conread position: 16-643
Cow position: chr2:81257807-81258494 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 297

Conread position: 16-644
Cow position: chr2:78763291-78763970 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 17-165
Cow position: chr2:36981022-36981181 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 17-236
Cow position: chr2:22078430-22078666 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 30

Conread position: 17-258
Cow position: chr2:50982712-50982444 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 17-260
Cow position: chr2:24147504-24147769 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 88

Conread position: 17-314
Cow position: chr2:53330403-53330731 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 17-600
Cow position: chr2:36277749-36277160 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 386
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 7

Conread position: 17-601
Cow position: chr2:33088764-33089323 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 379
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 79

Conread position: 17-601
Cow position: chr2:72187843-72187234 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 122

Conread position: 17-602
Cow position: chr2:6962159-6962776 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 17-643
Cow position: chr2:8119183-8119860 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 280

Conread position: 17-643
Cow position: chr2:10185587-10184908 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 344

Conread position: 17-643
Cow position: chr2:11158481-11157803 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 353

Conread position: 17-643
Cow position: chr2:12223633-12222960 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 347

Conread position: 17-643
Cow position: chr2:13045072-13044390 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 365

Conread position: 17-643
Cow position: chr2:16900900-16901573 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 348

Conread position: 17-643
Cow position: chr2:24925206-24925883 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 203

Conread position: 17-643
Cow position: chr2:28648957-28648291 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 300

Conread position: 17-643
Cow position: chr2:28793892-28794563 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 276

Conread position: 17-643
Cow position: chr2:42670064-42669384 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 17-643
Cow position: chr2:47811489-47812168 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 352

Conread position: 17-643
Cow position: chr2:80292112-80291445 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 214

Conread position: 18-415
Cow position: chr2:40453555-40453959 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 30

Conread position: 18-588
Cow position: chr2:6673888-6674482 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 18-601
Cow position: chr2:3789213-3788622 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 18-642
Cow position: chr2:57336187-57336865 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 350

Conread position: 19-475
Cow position: chr2:31662721-31663191 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 300
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 76

Conread position: 19-601
Cow position: chr2:55483501-55482896 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 19-642
Cow position: chr2:59413044-59412400 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 299

Conread position: 25-642
Cow position: chr2:78743238-78743872 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 26-614
Cow position: chr2:34051818-34052440 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 30

Conread position: 64-336
Cow position: chr2:53555165-53555427 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 39

Conread position: 66-286
Cow position: chr2:20901391-20901150 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 67-601
Cow position: chr2:574293-574851 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 287

Conread position: 69-387
Cow position: chr2:28619253-28618933 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 73

Conread position: 69-475
Cow position: chr2:13481966-13481577 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 81, 56

Conread position: 69-504
Cow position: chr2:42332187-42331729 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 8

Conread position: 69-577
Cow position: chr2:9908616-9909156 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 292

Conread position: 69-601
Cow position: chr2:364366-363803 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 293

Conread position: 69-601
Cow position: chr2:11730509-11731016 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 36

Conread position: 69-601
Cow position: chr2:36052309-36051761 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 69-603
Cow position: chr2:19012056-19012622 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 301

Conread position: 69-632
Cow position: chr2:39422326-39422930 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 293

Conread position: 69-642
Cow position: chr2:26905052-26904455 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 287

Conread position: 69-642
Cow position: chr2:41048348-41047711 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 69-642
Cow position: chr2:45938980-45938384 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 140

Conread position: 70-601
Cow position: chr2:32458340-32457795 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 37

Conread position: 70-601
Cow position: chr2:34563959-34563408 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 189

Conread position: 70-601
Cow position: chr2:43961399-43961938 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 366
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 40

Conread position: 71-642
Cow position: chr2:26922130-26922745 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 291

Conread position: 73-340
Cow position: chr2:5484302-5484050 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 181, 23

Conread position: 73-358
Cow position: chr2:49605647-49605941 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 60

Conread position: 73-422
Cow position: chr2:211552-211215 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 78

Conread position: 73-454
Cow position: chr2:17424558-17424970 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 292

Conread position: 73-474
Cow position: chr2:63291264-63290856 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 73-544
Cow position: chr2:62055896-62056366 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 311
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 184

Conread position: 73-557
Cow position: chr2:2412090-2411566 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 56

Conread position: 73-580
Cow position: chr2:38374493-38375024 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 168

Conread position: 73-597
Cow position: chr2:36975801-36976343 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 179

Conread position: 73-601
Cow position: chr2:10610940-10610380 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 199

Conread position: 73-601
Cow position: chr2:20892100-20891568 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 72

Conread position: 73-601
Cow position: chr2:43445657-43446225 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 321

Conread position: 73-601
Cow position: chr2:72681402-72680872 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 73-603
Cow position: chr2:2087460-2086902 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 249

Conread position: 73-603
Cow position: chr2:25887841-25887282 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 286

Conread position: 73-608
Cow position: chr2:28640138-28639571 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 234

Conread position: 73-642
Cow position: chr2:247172-246572 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 160

Conread position: 73-642
Cow position: chr2:9958361-9957755 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 73-642
Cow position: chr2:47037728-47037114 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 289

Conread position: 73-642
Cow position: chr2:52617181-52617793 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 286

Conread position: 73-647
Cow position: chr2:51617959-51618560 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 74-566
Cow position: chr2:44649987-44650478 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 346
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 94, 27

Conread position: 74-643
Cow position: chr2:19225587-19226162 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 280

Conread position: 74-643
Cow position: chr2:65937525-65936910 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 75-514
Cow position: chr2:49625198-49624758 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 300
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 83

Conread position: 76-601
Cow position: chr2:5903612-5903078 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 75

Conread position: 77-598
Cow position: chr2:3323851-3323303 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 177

Conread position: 77-601
Cow position: chr2:17823366-17823863 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 75

Conread position: 77-601
Cow position: chr2:35356727-35357252 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 77-601
Cow position: chr2:47602555-47601999 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 281

Conread position: 77-642
Cow position: chr2:4402448-4401833 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 78-290
Cow position: chr2:3834254-3834027 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 75

Conread position: 78-384
Cow position: chr2:1199012-1198694 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 34

Conread position: 78-599
Cow position: chr2:25766726-25767251 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 352
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 22

Conread position: 80-375
Cow position: chr2:36076515-36076227 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 45

Conread position: 80-453
Cow position: chr2:36992898-36993280 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 70, 165

Conread position: 80-578
Cow position: chr2:36029663-36029159 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 147

Conread position: 80-642
Cow position: chr2:14210085-14209505 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 94

Conread position: 81-603
Cow position: chr2:6006126-6005582 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 84-599
Cow position: chr2:56801890-56801406 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 353
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 36

Conread position: 84-601
Cow position: chr2:54738205-54738751 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 267

Conread position: 87-600
Cow position: chr2:6880077-6880622 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 266

Conread position: 87-601
Cow position: chr2:41180859-41181378 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 87-601
Cow position: chr2:50323845-50324344 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 87-643
Cow position: chr2:10264684-10264096 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 274

Conread position: 88-601
Cow position: chr2:11693206-11693735 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 89-497
Cow position: chr2:25743261-25743692 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 250

Conread position: 95-501
Cow position: chr2:66225741-66226152 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 80

Conread position: 100-644
Cow position: chr2:54693694-54694256 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 249

Conread position: 104-558
Cow position: chr2:24471889-24471408 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 249

Conread position: 104-643
Cow position: chr2:52063504-52064077 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 247

Conread position: 106-599
Cow position: chr2:905015-905525 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 146

Conread position: 108-514
Cow position: chr2:34473840-34473425 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 135

Conread position: 109-433
Cow position: chr2:41154562-41154907 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 124

Conread position: 112-601
Cow position: chr2:32065295-32064773 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 248

Conread position: 115-560
Cow position: chr2:16291434-16291910 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 201

Conread position: 116-603
Cow position: chr2:10732085-10731594 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 58

Conread position: 118-427
Cow position: chr2:5869586-5869280 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 27

Conread position: 129-601
Cow position: chr2:64768414-64767936 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 74

Conread position: 130-465
Cow position: chr2:1209117-1208770 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 238

Conread position: 137-330
Cow position: chr2:7629492-7629693 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 142-501
Cow position: chr2:33795086-33794714 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 168

Conread position: 157-504
Cow position: chr2:51988984-51988627 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 159

Conread position: 168-599
Cow position: chr2:20872663-20872233 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 171-452
Cow position: chr2:49631333-49631614 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 17

Conread position: 179-601
Cow position: chr2:47526537-47526104 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 87

Conread position: 181-536
Cow position: chr2:54408794-54408438 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 151

Conread position: 186-601
Cow position: chr2:36981221-36981654 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 188-643
Cow position: chr2:24926252-24926732 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 191-370
Cow position: chr2:11558619-11558803 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 155

Conread position: 191-601
Cow position: chr2:12696631-12696204 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 197-584
Cow position: chr2:72906380-72905967 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 260

Conread position: 214-597
Cow position: chr2:2394620-2395025 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 263
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 144

Conread position: 216-599
Cow position: chr2:85082067-85081689 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 18

Conread position: 221-642
Cow position: chr2:72688483-72688925 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 61

Conread position: 256-601
Cow position: chr2:14823957-14824300 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 39

Conread position: 256-601
Cow position: chr2:56888646-56889002 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 63

Conread position: 266-643
Cow position: chr2:50982222-50981830 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 78

Conread position: 274-601
Cow position: chr2:22078829-22079171 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 64

Conread position: 277-588
Cow position: chr2:39690837-39691154 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 102, 62

Conread position: 278-601
Cow position: chr2:63518904-63519229 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 43

Conread position: 285-587
Cow position: chr2:12363048-12362731 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 57

Conread position: 294-604
Cow position: chr2:47600746-47600417 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 239

Conread position: 296-643
Cow position: chr2:53330742-53331121 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 46

Conread position: 307-643
Cow position: chr2:13553527-13553885 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 35

Conread position: 311-637
Cow position: chr2:42361308-42360958 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 322-558
Cow position: chr2:12328104-12328357 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 22

Conread position: 327-488
Cow position: chr2:81504249-81504413 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 15

Conread position: 328-469
Cow position: chr2:31300121-31300267 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 32

Conread position: 333-643
Cow position: chr2:780424-780089 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 34, 27

Conread position: 339-497
Cow position: chr2:51397981-51397817 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 21

Conread position: 341-643
Cow position: chr2:32639936-32640262 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 351-642
Cow position: chr2:11558850-11559167 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 353-601
Cow position: chr2:62729515-62729775 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 7

Conread position: 355-515
Cow position: chr2:62727569-62727734 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 23

Conread position: 366-601
Cow position: chr2:37788997-37788747 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 369-638
Cow position: chr2:18242885-18242593 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 402-643
Cow position: chr2:11682205-11682463 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 175

Conread position: 403-601
Cow position: chr2:33082909-33082701 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 406-599
Cow position: chr2:31454526-31454726 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 10

Conread position: 410-601
Cow position: chr2:314823-314626 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 146

Conread position: 410-642
Cow position: chr2:5869066-5868816 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 74

Conread position: 419-612
Cow position: chr2:210966-210765 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 420-642
Cow position: chr2:44092448-44092677 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 85, 178

Conread position: 423-614
Cow position: chr2:41154991-41155199 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 137

Conread position: 426-643
Cow position: chr2:53005164-53004929 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 449-642
Cow position: chr2:25022006-25022220 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 449-642
Cow position: chr2:49303189-49302978 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 463-642
Cow position: chr2:67188728-67188924 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 103

Show alignments to all cow chromosomes.