Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               5-601
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 185
               

               Conread position:
               12-643
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 241
               

               Conread position:
               16-315
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               16-338
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               16-423
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               16-426
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 60
               

               Conread position:
               16-460
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 348
               

               Conread position:
               16-592
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 237
               

               Conread position:
               16-643
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 127
               

               Conread position:
               16-644
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               17-528
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 179
               

               Conread position:
               17-569
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 354
               

               Conread position:
               17-608
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 104
               

               Conread position:
               17-641
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 306
               

               Conread position:
               19-290
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 185
               

               Conread position:
               24-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 268
               

               Conread position:
               26-601
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 93
               

               Conread position:
               65-642
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 54
               

               Conread position:
               66-621
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               67-297
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               67-318
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               67-482
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               67-606
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 294
               

               Conread position:
               68-465
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 192
               

               Conread position:
               69-320
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               154, 110
               

               Conread position:
               69-581
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 246
               

               Conread position:
               69-595
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               370
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               77, 140
               

               Conread position:
               69-603
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 290
               

               Conread position:
               69-642
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 245
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               73-580
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 285
               

               Conread position:
               73-588
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 264
               

               Conread position:
               73-593
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 288
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 295
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 223
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 289
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 292
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 294
               

               Conread position:
               73-644
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 285
               

               Conread position:
               76-299
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 75
               

               Conread position:
               77-601
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               77-643
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 168
               

               Conread position:
               78-601
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 139
               

               Conread position:
               84-601
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 247
               

               Conread position:
               112-588
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 266
               

               Conread position:
               130-514
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               157-601
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               302
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               104, 66
               

               Conread position:
               157-642
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 201
               

               Conread position:
               161-446
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               179-601
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 142
               

               Conread position:
               186-595
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               187-643
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               220-424
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               260-643
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 82
               

               Conread position:
               266-601
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               285-643
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               295-504
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               295-582
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               114, 46
               

               Conread position:
               298-642
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               304-601
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               319-642
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               328-580
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               358-642
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               366-601
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               383-599
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               388-643
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               406-644
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               430-601
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 89
               
Show alignments to all cow chromosomes.