Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 53
               

               Conread position:
               7-643
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 361
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               8-601
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 353
               

               Conread position:
               16-415
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 259
               

               Conread position:
               16-454
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               46, 304
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 267
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               417
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 257
               

               Conread position:
               17-321
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               17-485
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               17-569
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               17-632
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 284
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 201
               

               Conread position:
               17-644
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               17-647
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 344
               

               Conread position:
               18-478
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               19-395
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 220
               

               Conread position:
               19-600
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 227
               

               Conread position:
               19-601
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 348
               

               Conread position:
               24-643
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               27-644
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               65-599
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 273
               

               Conread position:
               67-601
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 295
               

               Conread position:
               67-626
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               69-309
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               69-319
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               69-569
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 300
               

               Conread position:
               69-580
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               70-642
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               73-254
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 120
               

               Conread position:
               73-422
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 212
               

               Conread position:
               73-429
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               73-454
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 286
               

               Conread position:
               73-486
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               73-506
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               73-580
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 248
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 182
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 102
               

               Conread position:
               73-635
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 289
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 8
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 271
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 244
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 249
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               74-436
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 241
               

               Conread position:
               74-484
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               74-643
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 279
               

               Conread position:
               74-643
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 241
               

               Conread position:
               74-644
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 68
               

               Conread position:
               78-602
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               342
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               84-601
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               336
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 165
               

               Conread position:
               88-502
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 182
               

               Conread position:
               88-583
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               353
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               88-638
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               117-642
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 245
               

               Conread position:
               118-573
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               129-642
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               157-642
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 190
               

               Conread position:
               163-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               163-643
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               166-601
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 65
               

               Conread position:
               167-599
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 135
               

               Conread position:
               182-336
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               185-643
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               194-599
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               240-643
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               245-600
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               245-601
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 115
               

               Conread position:
               246-643
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 33
               

               Conread position:
               260-575
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               133, 82
               

               Conread position:
               274-642
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               285-433
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               292-564
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               307-516
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               323-642
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               342-643
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               351-573
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               351-642
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 77
               

               Conread position:
               358-642
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 99
               

               Conread position:
               376-586
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               410-601
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 174
               

               Conread position:
               418-601
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               421-601
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               503-644
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 141
               
Show alignments to all cow chromosomes.