Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               7-485
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               7-601
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               15-643
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               16-602
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               16-636
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 291
               

               Conread position:
               16-637
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 193
               

               Conread position:
               17-338
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               43, 209
               

               Conread position:
               17-504
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 324
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 348
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 274
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 246
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 379
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 308
               

               Conread position:
               18-335
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               18-423
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 346
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 343
               

               Conread position:
               18-601
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               18-603
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 262
               

               Conread position:
               26-578
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 95
               

               Conread position:
               66-580
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               351
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               174, 10
               

               Conread position:
               66-599
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               366
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               67-293
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               76, 180
               

               Conread position:
               67-598
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 271
               

               Conread position:
               67-608
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               69-423
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 236
               

               Conread position:
               69-504
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               69-523
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 283
               

               Conread position:
               69-587
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 293
               

               Conread position:
               69-601
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               355
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               76, 87
               

               Conread position:
               69-601
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               370
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 61
               

               Conread position:
               69-642
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 293
               

               Conread position:
               69-642
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 289
               

               Conread position:
               70-423
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 289
               

               Conread position:
               70-643
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 291
               

               Conread position:
               72-637
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               73-216
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               73-487
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 289
               

               Conread position:
               73-504
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 289
               

               Conread position:
               73-578
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 198
               

               Conread position:
               73-599
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 37
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 264
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 178
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 286
               

               Conread position:
               73-632
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 289
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 233
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 296
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               74-338
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               39, 168
               

               Conread position:
               74-637
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 273
               

               Conread position:
               74-642
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 278
               

               Conread position:
               75-296
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               75-601
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               375
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               97, 216
               

               Conread position:
               90-600
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               358
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               92-423
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 134
               

               Conread position:
               93-603
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               99-343
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               144-644
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 223
               

               Conread position:
               146-600
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               301
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               149-564
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 205
               

               Conread position:
               157-573
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               158-601
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 170
               

               Conread position:
               167-599
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               313, 77
               

               Conread position:
               167-601
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 182
               

               Conread position:
               167-632
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 178
               

               Conread position:
               170-585
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               170-602
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               171-588
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               171-601
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 110
               

               Conread position:
               175-595
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               179-643
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               182-336
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               182-601
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               189-415
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 157
               

               Conread position:
               194-487
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               198-538
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               216-580
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 326
               

               Conread position:
               216-601
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               289, 78
               

               Conread position:
               216-601
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               220-601
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               224-589
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               165, 27
               

               Conread position:
               224-601
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               256-600
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 82
               

               Conread position:
               259-601
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               271-603
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               280-642
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 62
               

               Conread position:
               281-643
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 61
               

               Conread position:
               313-601
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               332-637
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 28
               

               Conread position:
               334-643
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               361-600
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               398-603
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 64
               

               Conread position:
               410-643
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               419-601
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 166
               

               Conread position:
               422-601
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               428-601
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               440-601
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               474-642
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.