Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               16-642
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 208
               

               Conread position:
               17-356
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               17-569
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 355
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 363
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 358
               

               Conread position:
               18-593
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               18-601
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               18-608
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 204
               

               Conread position:
               26-608
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 155
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               69-642
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 293
               

               Conread position:
               69-642
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 206
               

               Conread position:
               69-643
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 292
               

               Conread position:
               72-335
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               89, 5
               

               Conread position:
               72-482
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 20
               

               Conread position:
               73-481
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 290
               

               Conread position:
               73-504
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 283
               

               Conread position:
               73-577
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 274
               

               Conread position:
               73-601
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 213
               

               Conread position:
               73-628
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 174
               

               Conread position:
               73-639
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 301
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 174
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 289
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 287
               

               Conread position:
               74-575
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               339
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               74-598
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               75-631
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 307
               

               Conread position:
               76-643
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 281
               

               Conread position:
               78-643
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 268
               

               Conread position:
               117-614
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 259
               

               Conread position:
               142-588
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               22, 228
               

               Conread position:
               143-601
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               276, 27
               

               Conread position:
               149-523
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               13, 164
               

               Conread position:
               162-503
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               162-635
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               164-645
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 101
               

               Conread position:
               168-602
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               176-535
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               181-586
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               182-597
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               211, 48
               

               Conread position:
               188-642
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 159
               

               Conread position:
               211-638
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 131
               

               Conread position:
               215-473
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               216-601
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               217-514
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               221-642
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               233-601
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               235-602
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               192, 20
               

               Conread position:
               255-478
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               286-601
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               134, 57
               

               Conread position:
               288-608
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               313-600
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               331-601
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               341-635
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               396-644
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               410-632
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               444-643
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               471-642
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               503-641
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.