Cow genome map


           Conread name:
           Ss1.1-rspc033_l13.5
        

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               401
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 368
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 304
               

               Conread position:
               17-614
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 359
               

               Conread position:
               17-634
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 348
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 243
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 356
               

               Conread position:
               17-643
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               18-643
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 344
               

               Conread position:
               19-601
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               24-625
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 193
               

               Conread position:
               41-373
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               41-501
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               55-601
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               67-586
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               348
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               67-601
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               67-643
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               69-218
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               69-477
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               69-502
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 203
               

               Conread position:
               69-643
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               72-337
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               72-379
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               73-453
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               73, 83
               

               Conread position:
               73-636
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 179
               

               Conread position:
               73-642
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 285
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 317
               

               Conread position:
               73-643
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               74-642
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               77-384
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               77-601
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               362
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 228
               

               Conread position:
               78-531
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               88-601
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               125-601
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               333
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               118, 15
               

               Conread position:
               142-514
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               161-644
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               163-472
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               169-602
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               188-603
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               189-643
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 157
               

               Conread position:
               218-422
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               220-608
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               223-566
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               223-601
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               238-643
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 101
               

               Conread position:
               256-600
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 86
               

               Conread position:
               258-554
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 84
               

               Conread position:
               262-587
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 82
               

               Conread position:
               263-594
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               228, 10
               

               Conread position:
               267-643
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               339-638
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               342-643
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               355-621
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               408-643
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               502-640
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.