Cow genome map

Conread name: Ss1.1-rspc033_l13.5

Conread position: 1-535
Cow position:
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 285

Conread position: 2-628
Cow position:
Alignm length: 669
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 18

Conread position: 4-577
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 333

Conread position: 5-642
Cow position:
Alignm length: 683
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 7-583
Cow position:
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 16-643
Cow position:
Alignm length: 683
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 17-263
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 99

Conread position: 17-325
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 183

Conread position: 17-385
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 17-392
Cow position:
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 312

Conread position: 17-601
Cow position:
Alignm length: 627
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 347

Conread position: 17-601
Cow position:
Alignm length: 633
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 17-601
Cow position:
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 17-601
Cow position:
Alignm length: 618
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 56

Conread position: 17-614
Cow position:
Alignm length: 633
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 214

Conread position: 17-642
Cow position:
Alignm length: 668
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 17-642
Cow position:
Alignm length: 675
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 344

Conread position: 17-643
Cow position:
Alignm length: 668
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 166

Conread position: 17-643
Cow position:
Alignm length: 672
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 17-643
Cow position:
Alignm length: 686
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 17-643
Cow position:
Alignm length: 672
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 365

Conread position: 17-643
Cow position:
Alignm length: 680
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 308

Conread position: 17-643
Cow position:
Alignm length: 676
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 143

Conread position: 17-643
Cow position:
Alignm length: 671
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 191

Conread position: 17-643
Cow position:
Alignm length: 707
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 285

Conread position: 18-249
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 18-423
Cow position:
Alignm length: 429
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 101

Conread position: 18-601
Cow position:
Alignm length: 616
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 207

Conread position: 18-643
Cow position:
Alignm length: 673
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 79

Conread position: 24-578
Cow position:
Alignm length: 575
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 39

Conread position: 24-601
Cow position:
Alignm length: 621
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 98

Conread position: 25-388
Cow position:
Alignm length: 376
Alignm identity: 249
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 82

Conread position: 30-169
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 18

Conread position: 67-428
Cow position:
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 292

Conread position: 67-577
Cow position:
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 34

Conread position: 68-601
Cow position:
Alignm length: 568
Alignm identity: 375
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 79, 234

Conread position: 69-300
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 69-418
Cow position:
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 290

Conread position: 69-483
Cow position:
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 290

Conread position: 69-601
Cow position:
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 69-601
Cow position:
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 290

Conread position: 69-601
Cow position:
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 50

Conread position: 69-614
Cow position:
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 291

Conread position: 69-632
Cow position:
Alignm length: 615
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 299

Conread position: 69-642
Cow position:
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 291

Conread position: 69-643
Cow position:
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 293

Conread position: 70-454
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 289

Conread position: 70-642
Cow position:
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 291

Conread position: 72-418
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 84

Conread position: 73-240
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 52

Conread position: 73-283
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 73-392
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 140

Conread position: 73-452
Cow position:
Alignm length: 399
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 117

Conread position: 73-564
Cow position:
Alignm length: 522
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 285

Conread position: 73-586
Cow position:
Alignm length: 548
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 46

Conread position: 73-601
Cow position:
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 205

Conread position: 73-601
Cow position:
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 129

Conread position: 73-601
Cow position:
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 286

Conread position: 73-642
Cow position:
Alignm length: 627
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 286

Conread position: 73-643
Cow position:
Alignm length: 613
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 78

Conread position: 73-643
Cow position:
Alignm length: 626
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 241

Conread position: 74-514
Cow position:
Alignm length: 456
Alignm identity: 303
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 64, 101

Conread position: 77-630
Cow position:
Alignm length: 576
Alignm identity: 365
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 53

Conread position: 84-340
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 52

Conread position: 87-601
Cow position:
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 90-604
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 124

Conread position: 93-601
Cow position:
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 260

Conread position: 98-637
Cow position:
Alignm length: 570
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 160

Conread position: 109-642
Cow position:
Alignm length: 579
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 125-603
Cow position:
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 93

Conread position: 127-502
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 227

Conread position: 132-601
Cow position:
Alignm length: 491
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 142

Conread position: 138-599
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 59

Conread position: 142-608
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 200

Conread position: 144-643
Cow position:
Alignm length: 534
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 37

Conread position: 157-444
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 189

Conread position: 157-601
Cow position:
Alignm length: 469
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 89

Conread position: 157-601
Cow position:
Alignm length: 467
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 158

Conread position: 157-642
Cow position:
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 192

Conread position: 157-642
Cow position:
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 161-538
Cow position:
Alignm length: 405
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 141

Conread position: 162-482
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 83

Conread position: 163-643
Cow position:
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 184

Conread position: 171-642
Cow position:
Alignm length: 502
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 179

Conread position: 178-464
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 7

Conread position: 181-601
Cow position:
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 167

Conread position: 185-575
Cow position:
Alignm length: 411
Alignm identity: 274
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 134

Conread position: 199-503
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 138

Conread position: 216-585
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 41

Conread position: 216-601
Cow position:
Alignm length: 401
Alignm identity: 254
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 111

Conread position: 217-643
Cow position:
Alignm length: 452
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 241-643
Cow position:
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 99

Conread position: 255-470
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 76

Conread position: 255-475
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 84

Conread position: 256-642
Cow position:
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 86

Conread position: 266-643
Cow position:
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 82

Conread position: 274-644
Cow position:
Alignm length: 396
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 86

Conread position: 293-601
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 49

Conread position: 295-643
Cow position:
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 47

Conread position: 302-588
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 46

Conread position: 330-643
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 47

Conread position: 332-601
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 22

Conread position: 350-603
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 10

Conread position: 359-601
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 373-637
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 15

Conread position: 396-601
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 9

Conread position: 410-601
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 65

Conread position: 414-643
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 92, 14

Conread position: 424-603
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 426-643
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 108

Conread position: 429-601
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 45

Conread position: 444-601
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 115

Show alignments to all cow chromosomes.