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Cow genome map

           
Conread name:
           
Ss1.1-rspc033_l13.5
        

               
Conread position:
               
2-481
               

               
Cow position:
               
chr3:37952980-37952478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
4-601
               

               
Cow position:
               
chr3:4736859-4736276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr3:36118907-36119234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
52, 184
               

               
Conread position:
               
5-601
               

               
Cow position:
               
chr3:3524036-3524660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 258
               

               
Conread position:
               
5-601
               

               
Cow position:
               
chr3:7247556-7248181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 373
               

               
Conread position:
               
5-642
               

               
Cow position:
               
chr3:74058543-74059227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
7-601
               

               
Cow position:
               
chr3:65208213-65208824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 229
               

               
Conread position:
               
7-642
               

               
Cow position:
               
chr3:2869807-2870490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 366
               

               
Conread position:
               
7-642
               

               
Cow position:
               
chr3:20382042-20382737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 389
               

               
Conread position:
               
7-642
               

               
Cow position:
               
chr3:66889953-66889266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 282
               

               
Conread position:
               
8-643
               

               
Cow position:
               
chr3:45975515-45976201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
12-643
               

               
Cow position:
               
chr3:49136550-49135863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 360
               

               
Conread position:
               
12-643
               

               
Cow position:
               
chr3:72631085-72631758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
13-643
               

               
Cow position:
               
chr3:5884555-5885204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 204
               

               
Conread position:
               
16-190
               

               
Cow position:
               
chr3:19945269-19945445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
16-282
               

               
Cow position:
               
chr3:15181387-15181676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
16-485
               

               
Cow position:
               
chr3:3057829-3058339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 361
               

               
Conread position:
               
16-514
               

               
Cow position:
               
chr3:63002515-63002006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
16-573
               

               
Cow position:
               
chr3:2906748-2906136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 344
               

               
Conread position:
               
16-593
               

               
Cow position:
               
chr3:6877139-6876547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
16-601
               

               
Cow position:
               
chr3:6686835-6687436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
16-608
               

               
Cow position:
               
chr3:67164313-67164942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 362
               

               
Conread position:
               
16-642
               

               
Cow position:
               
chr3:38494264-38494941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 372
               

               
Conread position:
               
16-643
               

               
Cow position:
               
chr3:24445050-24444399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 210
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr3:33845652-33845279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
17-401
               

               
Cow position:
               
chr3:56339388-56338980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 273
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr3:59862405-59862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 226
               

               
Conread position:
               
17-601
               

               
Cow position:
               
chr3:46017072-46017690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
17-601
               

               
Cow position:
               
chr3:56146340-56146953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
17-642
               

               
Cow position:
               
chr3:30617896-30617222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 351
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:2709843-2709168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:18812528-18813201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 345
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:19755908-19755262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 224
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:30315585-30316249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:42448135-42448808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 355
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:48058329-48057659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 343
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:49544181-49543510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:57483703-57483024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 354
               

               
Conread position:
               
17-643
               

               
Cow position:
               
chr3:64016346-64015682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 364
               

               
Conread position:
               
17-644
               

               
Cow position:
               
chr3:595164-595828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 349
               

               
Conread position:
               
18-423
               

               
Cow position:
               
chr3:10240688-10241114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 246
               

               
Conread position:
               
18-571
               

               
Cow position:
               
chr3:52653617-52653043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 231
               

               
Conread position:
               
18-601
               

               
Cow position:
               
chr3:15054645-15054056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
18-601
               

               
Cow position:
               
chr3:24458142-24457532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
18-601
               

               
Cow position:
               
chr3:36877631-36877011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 354
               

               
Conread position:
               
18-643
               

               
Cow position:
               
chr3:68872721-68872053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 344
               

               
Conread position:
               
19-580
               

               
Cow position:
               
chr3:18354977-18354405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
19-601
               

               
Cow position:
               
chr3:24644261-24644862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
19-601
               

               
Cow position:
               
chr3:68698938-68698326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 340
               

               
Conread position:
               
19-604
               

               
Cow position:
               
chr3:50916369-50916989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
19-643
               

               
Cow position:
               
chr3:7478893-7478225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 356
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr3:33634138-33634481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
24-601
               

               
Cow position:
               
chr3:77424655-77425240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
24-643
               

               
Cow position:
               
chr3:23289296-23288632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
27-282
               

               
Cow position:
               
chr3:42052121-42051850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
27-373
               

               
Cow position:
               
chr3:24588411-24588058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
27-583
               

               
Cow position:
               
chr3:53412178-53412760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
27-621
               

               
Cow position:
               
chr3:2854406-2853779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
64-643
               

               
Cow position:
               
chr3:78026328-78025720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
66-600
               

               
Cow position:
               
chr3:60263936-60263370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chr3:24347045-24347295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
67-404
               

               
Cow position:
               
chr3:56398265-56398620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
67-521
               

               
Cow position:
               
chr3:64823187-64823666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 292
               

               
Conread position:
               
67-575
               

               
Cow position:
               
chr3:29579711-29580232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 153
               

               
Conread position:
               
68-564
               

               
Cow position:
               
chr3:56100598-56100078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 260
               

               
Conread position:
               
68-642
               

               
Cow position:
               
chr3:27919511-27920108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 291
               

               
Conread position:
               
69-250
               

               
Cow position:
               
chr3:42720607-42720412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
69-300
               

               
Cow position:
               
chr3:48229387-48229139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
69-373
               

               
Cow position:
               
chr3:70888225-70888539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
69-472
               

               
Cow position:
               
chr3:48843339-48843769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 292
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr3:33843729-33843287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
69-588
               

               
Cow position:
               
chr3:2368252-2367703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 203
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:4287174-4287735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 203
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:30331036-30330494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 294
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:36863373-36862809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 293
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:45033828-45034388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:47087388-47087926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
69-601
               

               
Cow position:
               
chr3:56295273-56295834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
69-632
               

               
Cow position:
               
chr3:18860502-18861112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 293
               

               
Conread position:
               
69-641
               

               
Cow position:
               
chr3:1742418-1743031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 201
               

               
Conread position:
               
69-642
               

               
Cow position:
               
chr3:7157635-7157017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
69-642
               

               
Cow position:
               
chr3:29330204-29329588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 292
               

               
Conread position:
               
69-642
               

               
Cow position:
               
chr3:64651722-64652310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 290
               

               
Conread position:
               
69-643
               

               
Cow position:
               
chr3:46503643-46504251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 146
               

               
Conread position:
               
69-644
               

               
Cow position:
               
chr3:34506258-34505651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 202
               

               
Conread position:
               
70-642
               

               
Cow position:
               
chr3:2918553-2919166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 291
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr3:6662447-6662801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 161
               

               
Conread position:
               
72-642
               

               
Cow position:
               
chr3:5993997-5993387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 291
               

               
Conread position:
               
73-238
               

               
Cow position:
               
chr3:56635688-56635863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
73-238
               

               
Cow position:
               
chr3:64356709-64356526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
73-363
               

               
Cow position:
               
chr3:31319254-31319556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
73-423
               

               
Cow position:
               
chr3:38867407-38867778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 285
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr3:47080321-47079811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 289
               

               
Conread position:
               
73-588
               

               
Cow position:
               
chr3:31416109-31416652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 242
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr3:6783457-6784017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr3:19800083-19799530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 285
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr3:55892506-55893037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
73-601
               

               
Cow position:
               
chr3:64027046-64026489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 289
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr3:19879735-19880346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 296
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr3:32621950-32621340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 230
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr3:37970135-37970747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 289
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr3:41209513-41208911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 289
               

               
Conread position:
               
73-642
               

               
Cow position:
               
chr3:46860201-46859592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 291
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr3:21181605-21180996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 287
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr3:53516693-53517311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 242
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr3:3840420-3839816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 219
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr3:40824482-40825094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
74-412
               

               
Cow position:
               
chr3:19939983-19940338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
74-549
               

               
Cow position:
               
chr3:18943124-18943613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 185
               

               
Conread position:
               
74-619
               

               
Cow position:
               
chr3:39879919-39879363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
75-601
               

               
Cow position:
               
chr3:72671434-72670903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr3:13476486-13476911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
77-529
               

               
Cow position:
               
chr3:51939006-51938527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 285
               

               
Conread position:
               
77-600
               

               
Cow position:
               
chr3:51364693-51364141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 285
               

               
Conread position:
               
77-601
               

               
Cow position:
               
chr3:19832822-19832271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
78-642
               

               
Cow position:
               
chr3:40339053-40338446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 283
               

               
Conread position:
               
89-599
               

               
Cow position:
               
chr3:67768937-67769454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
92-382
               

               
Cow position:
               
chr3:57979506-57979221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
112-603
               

               
Cow position:
               
chr3:58948668-58949179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 243
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr3:34198025-34198333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
125-380
               

               
Cow position:
               
chr3:55486143-55486408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
142-492
               

               
Cow position:
               
chr3:73529650-73530002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
142-643
               

               
Cow position:
               
chr3:63241075-63240542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr3:65208049-65207678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 203
               

               
Conread position:
               
150-643
               

               
Cow position:
               
chr3:23206700-23206174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 149
               

               
Conread position:
               
157-418
               

               
Cow position:
               
chr3:2509854-2509586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
157-596
               

               
Cow position:
               
chr3:18462646-18462202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
157-601
               

               
Cow position:
               
chr3:44925247-44925711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 193
               

               
Conread position:
               
157-640
               

               
Cow position:
               
chr3:56327299-56327806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
157-644
               

               
Cow position:
               
chr3:29575938-29575422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
161-602
               

               
Cow position:
               
chr3:16887694-16887246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
163-492
               

               
Cow position:
               
chr3:6495682-6496021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
164-601
               

               
Cow position:
               
chr3:7313271-7312828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
164-601
               

               
Cow position:
               
chr3:34029716-34029271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 63
               

               
Conread position:
               
167-587
               

               
Cow position:
               
chr3:8239895-8240326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
167-614
               

               
Cow position:
               
chr3:19720460-19719997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
171-492
               

               
Cow position:
               
chr3:16898989-16898668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr3:40616635-40616422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 164
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr3:16076574-16076991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
181-608
               

               
Cow position:
               
chr3:66621411-66621851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
182-599
               

               
Cow position:
               
chr3:4667312-4667740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
188-603
               

               
Cow position:
               
chr3:24354378-24354797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
188-643
               

               
Cow position:
               
chr3:5952964-5952485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
197-497
               

               
Cow position:
               
chr3:57658530-57658831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 140
               

               
Conread position:
               
200-601
               

               
Cow position:
               
chr3:75184665-75185054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
215-602
               

               
Cow position:
               
chr3:51138555-51138937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
216-336
               

               
Cow position:
               
chr3:83231676-83231560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
216-513
               

               
Cow position:
               
chr3:29338654-29338350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
216-558
               

               
Cow position:
               
chr3:84197071-84197421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
216-601
               

               
Cow position:
               
chr3:79122348-79121960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
216-602
               

               
Cow position:
               
chr3:43481046-43481436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
217-603
               

               
Cow position:
               
chr3:32200271-32200667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
232-585
               

               
Cow position:
               
chr3:62503391-62503757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
235-593
               

               
Cow position:
               
chr3:74851857-74851508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
241-603
               

               
Cow position:
               
chr3:27864454-27864823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
241-642
               

               
Cow position:
               
chr3:68891292-68890875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
246-514
               

               
Cow position:
               
chr3:73302551-73302816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
254-642
               

               
Cow position:
               
chr3:16224176-16224587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
256-593
               

               
Cow position:
               
chr3:34090191-34089840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
164, 94
               

               
Conread position:
               
256-601
               

               
Cow position:
               
chr3:18558120-18558465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
279-582
               

               
Cow position:
               
chr3:53927843-53927537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
292-601
               

               
Cow position:
               
chr3:54291251-54290933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
303-601
               

               
Cow position:
               
chr3:19945583-19945899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
315-643
               

               
Cow position:
               
chr3:69932483-69932132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
328-644
               

               
Cow position:
               
chr3:8438403-8438738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
349-643
               

               
Cow position:
               
chr3:43191908-43191590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
359-612
               

               
Cow position:
               
chr3:48229121-48228857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
367-642
               

               
Cow position:
               
chr3:51857290-51856989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
389-601
               

               
Cow position:
               
chr3:56338846-56338622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
402-602
               

               
Cow position:
               
chr3:21028177-21027969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 165
               

               
Conread position:
               
403-601
               

               
Cow position:
               
chr3:19940371-19940578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
404-601
               

               
Cow position:
               
chr3:4029174-4029381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
405-601
               

               
Cow position:
               
chr3:2509423-2509226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
417-601
               

               
Cow position:
               
chr3:64356508-64356317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
419-599
               

               
Cow position:
               
chr3:15188269-15188456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
421-643
               

               
Cow position:
               
chr3:59863024-59863264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
426-642
               

               
Cow position:
               
chr3:58784689-58784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
426-643
               

               
Cow position:
               
chr3:10242120-10242355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
427-643
               

               
Cow position:
               
chr3:25687716-25687948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
433-643
               

               
Cow position:
               
chr3:38868061-38868293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
467-597
               

               
Cow position:
               
chr3:38095464-38095601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
473-601
               

               
Cow position:
               
chr3:3058526-3058653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 83
               
Show alignments to all cow chromosomes.