Cow genome map
| Conread name: | Ss1.1-rspc033_l13.5 |
| Conread position: | 1-504 |
| Cow position: | chr4:27300670-27300168 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 185 |
| Conread position: | 12-423 |
| Cow position: | chr4:61693689-61693253 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 248 |
| Conread position: | 13-599 |
| Cow position: | chr4:14755837-14755225 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 15-643 |
| Cow position: | chr4:17925132-17924456 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 349 |
| Conread position: | 16-460 |
| Cow position: | chr4:493766-493331 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 16-573 |
| Cow position: | chr4:9847381-9846783 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 355 |
| Conread position: | 16-597 |
| Cow position: | chr4:14820026-14819457 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 16-601 |
| Cow position: | chr4:16360747-16361373 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 220 |
| Conread position: | 16-601 |
| Cow position: | chr4:34178404-34177804 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 250 |
| Conread position: | 16-643 |
| Cow position: | chr4:13494162-13494837 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 346 |
| Conread position: | 17-251 |
| Cow position: | chr4:41333522-41333774 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 17-268 |
| Cow position: | chr4:31564471-31564212 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 17-515 |
| Cow position: | chr4:37597-37087 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 17-601 |
| Cow position: | chr4:5926005-5925406 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 407 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 17-635 |
| Cow position: | chr4:12588164-12588816 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 212 |
| Conread position: | 17-643 |
| Cow position: | chr4:356744-357410 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 324 |
| Conread position: | 17-643 |
| Cow position: | chr4:1049424-1048759 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 280 |
| Conread position: | 17-643 |
| Cow position: | chr4:12240384-12239729 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 347 |
| Conread position: | 17-643 |
| Cow position: | chr4:16639446-16640115 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 17-643 |
| Cow position: | chr4:25598664-25597981 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 17-643 |
| Cow position: | chr4:26876947-26876284 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 246 |
| Conread position: | 17-643 |
| Cow position: | chr4:33071985-33071334 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 17-643 |
| Cow position: | chr4:36897209-36897878 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 305 |
| Conread position: | 17-643 |
| Cow position: | chr4:43881940-43882607 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 351 |
| Conread position: | 17-643 |
| Cow position: | chr4:57984820-57985496 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 18-563 |
| Cow position: | chr4:13870844-13871382 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 6 |
| Conread position: | 18-643 |
| Cow position: | chr4:34183789-34183173 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 24-290 |
| Cow position: | chr4:28832408-28832676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 24-325 |
| Cow position: | chr4:11110436-11110117 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 293 |
| Conread position: | 24-534 |
| Cow position: | chr4:54969571-54970091 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 221 |
| Conread position: | 27-482 |
| Cow position: | chr4:69521386-69521845 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 65-601 |
| Cow position: | chr4:6206493-6207051 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 188 |
| Conread position: | 69-354 |
| Cow position: | chr4:68110137-68109837 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 73, 235 |
| Conread position: | 69-498 |
| Cow position: | chr4:45106354-45106809 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 283 |
| Conread position: | 69-621 |
| Cow position: | chr4:38930299-38930861 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 152 |
| Conread position: | 69-642 |
| Cow position: | chr4:30472126-30472718 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 69-644 |
| Cow position: | chr4:5881050-5881660 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 218 |
| Conread position: | 70-514 |
| Cow position: | chr4:51042399-51041933 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 265 |
| Conread position: | 72-334 |
| Cow position: | chr4:41428206-41428486 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 72-642 |
| Cow position: | chr4:18337749-18338358 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 286 |
| Conread position: | 73-387 |
| Cow position: | chr4:46665424-46665757 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 247 |
| Conread position: | 73-601 |
| Cow position: | chr4:1929743-1929190 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 289 |
| Conread position: | 73-601 |
| Cow position: | chr4:6615225-6614674 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 357 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 73, 269 |
| Conread position: | 73-601 |
| Cow position: | chr4:19005411-19004879 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 73-601 |
| Cow position: | chr4:41959793-41960351 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 288 |
| Conread position: | 73-601 |
| Cow position: | chr4:42405505-42406067 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 288 |
| Conread position: | 73-601 |
| Cow position: | chr4:44780327-44779769 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 285 |
| Conread position: | 73-601 |
| Cow position: | chr4:60263262-60262719 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 201 |
| Conread position: | 73-626 |
| Cow position: | chr4:43672420-43672979 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 152, 44 |
| Conread position: | 73-632 |
| Cow position: | chr4:4416957-4417545 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 147 |
| Conread position: | 73-642 |
| Cow position: | chr4:160060-160662 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 276 |
| Conread position: | 73-642 |
| Cow position: | chr4:530302-530923 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 73-642 |
| Cow position: | chr4:3126702-3127315 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 307 |
| Conread position: | 73-642 |
| Cow position: | chr4:5443934-5443320 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 287 |
| Conread position: | 73-642 |
| Cow position: | chr4:6567284-6567884 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 239 |
| Conread position: | 73-642 |
| Cow position: | chr4:18423625-18423017 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 73-642 |
| Cow position: | chr4:32213062-32213677 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 307 |
| Conread position: | 73-643 |
| Cow position: | chr4:6489466-6488863 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 275 |
| Conread position: | 73-643 |
| Cow position: | chr4:10882449-10883042 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 73-643 |
| Cow position: | chr4:41191705-41191127 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 241 |
| Conread position: | 73-643 |
| Cow position: | chr4:43318742-43318131 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 288 |
| Conread position: | 73-643 |
| Cow position: | chr4:44726485-44727083 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 153 |
| Conread position: | 73-644 |
| Cow position: | chr4:99318-98708 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 299 |
| Conread position: | 74-423 |
| Cow position: | chr4:4178155-4178511 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 74-584 |
| Cow position: | chr4:22474248-22474756 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 355 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 74-601 |
| Cow position: | chr4:41955659-41956215 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 74-601 |
| Cow position: | chr4:57957895-57958403 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 77-642 |
| Cow position: | chr4:17092963-17092359 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 282 |
| Conread position: | 77-643 |
| Cow position: | chr4:67682096-67682703 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 279 |
| Conread position: | 78-602 |
| Cow position: | chr4:20604632-20605132 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 68 |
| Conread position: | 80-478 |
| Cow position: | chr4:39268245-39267844 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 92-601 |
| Cow position: | chr4:13958094-13958623 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 96-601 |
| Cow position: | chr4:9355298-9355831 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 250 |
| Conread position: | 112-503 |
| Cow position: | chr4:47486249-47486659 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 224 |
| Conread position: | 118-370 |
| Cow position: | chr4:14138983-14139248 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 120-573 |
| Cow position: | chr4:20067775-20067303 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 142-601 |
| Cow position: | chr4:47522326-47522800 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 191 |
| Conread position: | 154-415 |
| Cow position: | chr4:52268791-52268525 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 155 |
| Conread position: | 157-601 |
| Cow position: | chr4:65665405-65664960 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 192 |
| Conread position: | 158-481 |
| Cow position: | chr4:47462812-47463144 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 161-626 |
| Cow position: | chr4:52963126-52962659 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 161-642 |
| Cow position: | chr4:31638923-31638425 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 337 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 162-425 |
| Cow position: | chr4:42926042-42925772 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 156 |
| Conread position: | 163-600 |
| Cow position: | chr4:22027445-22027003 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 125 |
| Conread position: | 163-643 |
| Cow position: | chr4:33494550-33495060 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 164-603 |
| Cow position: | chr4:49716780-49717233 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 165-587 |
| Cow position: | chr4:50806517-50806931 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 165-642 |
| Cow position: | chr4:63428026-63427545 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 167-601 |
| Cow position: | chr4:6865503-6865056 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 170-594 |
| Cow position: | chr4:6519837-6520234 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 171-601 |
| Cow position: | chr4:21359233-21359684 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 171-601 |
| Cow position: | chr4:33596543-33596971 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 174-601 |
| Cow position: | chr4:1952562-1952115 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 178-642 |
| Cow position: | chr4:37988351-37988841 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 181-612 |
| Cow position: | chr4:60627848-60627414 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 182-434 |
| Cow position: | chr4:19742902-19742652 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 182-626 |
| Cow position: | chr4:46200691-46200252 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 207, 30 |
| Conread position: | 182-642 |
| Cow position: | chr4:17502317-17501826 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 167 |
| Conread position: | 191-603 |
| Cow position: | chr4:27334954-27335393 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 191-642 |
| Cow position: | chr4:14386844-14387327 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 194-601 |
| Cow position: | chr4:28653466-28653043 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 162 |
| Conread position: | 200-631 |
| Cow position: | chr4:16060317-16060772 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 216-466 |
| Cow position: | chr4:39932000-39932255 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 216-482 |
| Cow position: | chr4:31564230-31563957 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 216-580 |
| Cow position: | chr4:18475904-18475533 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 216-601 |
| Cow position: | chr4:21258216-21258628 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 173, 15 |
| Conread position: | 216-602 |
| Cow position: | chr4:50847844-50847450 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 216-642 |
| Cow position: | chr4:604683-605131 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 218-601 |
| Cow position: | chr4:20236342-20235945 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 238-601 |
| Cow position: | chr4:19094063-19094430 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 177, 35 |
| Conread position: | 245-643 |
| Cow position: | chr4:3356849-3356429 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 87 |
| Conread position: | 255-603 |
| Cow position: | chr4:65916372-65916716 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 248, 61 |
| Conread position: | 256-441 |
| Cow position: | chr4:25735564-25735743 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 83 |
| Conread position: | 257-601 |
| Cow position: | chr4:34221844-34222200 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 259-601 |
| Cow position: | chr4:952047-952390 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 260-601 |
| Cow position: | chr4:8702667-8703005 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 268-637 |
| Cow position: | chr4:11813215-11813585 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 81 |
| Conread position: | 275-606 |
| Cow position: | chr4:52230157-52229828 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 81 |
| Conread position: | 280-643 |
| Cow position: | chr4:28832840-28833219 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 281-601 |
| Cow position: | chr4:41978275-41977935 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 289-614 |
| Cow position: | chr4:18102530-18102187 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 292-642 |
| Cow position: | chr4:33022505-33022134 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 293-575 |
| Cow position: | chr4:64216539-64216262 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 318-600 |
| Cow position: | chr4:61986120-61985828 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 328-601 |
| Cow position: | chr4:11109902-11109625 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 339-642 |
| Cow position: | chr4:6268011-6267686 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 347-637 |
| Cow position: | chr4:44742057-44741766 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 360-642 |
| Cow position: | chr4:827405-827713 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 365-601 |
| Cow position: | chr4:17244308-17244558 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 367-643 |
| Cow position: | chr4:48028065-48028363 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 373-599 |
| Cow position: | chr4:14139588-14139821 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 399-601 |
| Cow position: | chr4:20241759-20241972 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 420-607 |
| Cow position: | chr4:63199210-63199012 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 425-642 |
| Cow position: | chr4:60649711-60649952 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 426-601 |
| Cow position: | chr4:68837728-68837545 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 428-599 |
| Cow position: | chr4:43867466-43867644 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 428-638 |
| Cow position: | chr4:46666192-46666409 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 78, 162 |
| Conread position: | 433-601 |
| Cow position: | chr4:67797627-67797455 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 460-643 |
| Cow position: | chr4:43898238-43898033 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 495-643 |
| Cow position: | chr4:27296440-27296285 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.