Cow genome map
| Conread name: | Ss1.1-rspc033_l13.5 |
| Conread position: | 1-166 |
| Cow position: | chr9:22432256-22432431 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-585 |
| Cow position: | chr9:26083574-26082954 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 225 |
| Conread position: | 1-601 |
| Cow position: | chr9:20939301-20939931 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 2-532 |
| Cow position: | chr9:3727586-3728133 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 2-593 |
| Cow position: | chr9:25633031-25632400 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 416 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 334 |
| Conread position: | 4-504 |
| Cow position: | chr9:7158960-7158425 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 306 |
| Conread position: | 5-601 |
| Cow position: | chr9:3309615-3310236 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 117 |
| Conread position: | 5-601 |
| Cow position: | chr9:51181189-51180558 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 361 |
| Conread position: | 5-642 |
| Cow position: | chr9:47042947-47043635 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 364 |
| Conread position: | 7-415 |
| Cow position: | chr9:2053915-2054341 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 7-464 |
| Cow position: | chr9:3005246-3004766 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 12-603 |
| Cow position: | chr9:37970212-37969585 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 218 |
| Conread position: | 16-292 |
| Cow position: | chr9:3372305-3372024 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 131, 73 |
| Conread position: | 16-436 |
| Cow position: | chr9:2497978-2497525 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 16-496 |
| Cow position: | chr9:22192284-22192784 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 333 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 40, 271 |
| Conread position: | 16-538 |
| Cow position: | chr9:1981273-1981819 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 16-597 |
| Cow position: | chr9:2871328-2871950 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 373 |
| Conread position: | 16-599 |
| Cow position: | chr9:4942808-4942188 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 16-601 |
| Cow position: | chr9:25188098-25188711 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 329 |
| Conread position: | 16-601 |
| Cow position: | chr9:31808576-31809197 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 356 |
| Conread position: | 16-601 |
| Cow position: | chr9:54925553-54926157 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 16-604 |
| Cow position: | chr9:8165881-8165273 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 403 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 264 |
| Conread position: | 16-629 |
| Cow position: | chr9:221510-220882 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 229 |
| Conread position: | 16-637 |
| Cow position: | chr9:59428009-59428667 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 16-642 |
| Cow position: | chr9:50698302-50698965 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 265 |
| Conread position: | 16-643 |
| Cow position: | chr9:7061081-7060391 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 356 |
| Conread position: | 16-643 |
| Cow position: | chr9:44819147-44819808 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 17-321 |
| Cow position: | chr9:10322803-10323134 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 17-344 |
| Cow position: | chr9:16176769-16177104 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 17-422 |
| Cow position: | chr9:60277015-60276584 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 17-423 |
| Cow position: | chr9:29027211-29026773 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 352 |
| Conread position: | 17-497 |
| Cow position: | chr9:56807366-56806868 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 17-504 |
| Cow position: | chr9:22654576-22655097 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 351 |
| Conread position: | 17-550 |
| Cow position: | chr9:10937595-10938164 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 178 |
| Conread position: | 17-564 |
| Cow position: | chr9:32969948-32970527 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 17-601 |
| Cow position: | chr9:59537098-59537723 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 369 |
| Conread position: | 17-637 |
| Cow position: | chr9:18508822-18508158 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 347 |
| Conread position: | 17-643 |
| Cow position: | chr9:17304976-17304301 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 349 |
| Conread position: | 17-643 |
| Cow position: | chr9:19158539-19157854 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 17-643 |
| Cow position: | chr9:21410297-21410980 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 375 |
| Conread position: | 17-643 |
| Cow position: | chr9:27783188-27783860 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 307 |
| Conread position: | 17-643 |
| Cow position: | chr9:28022806-28023474 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 17-643 |
| Cow position: | chr9:42310678-42311366 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 288 |
| Conread position: | 17-644 |
| Cow position: | chr9:6250299-6250959 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 114 |
| Conread position: | 18-588 |
| Cow position: | chr9:4666189-4666784 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 18-642 |
| Cow position: | chr9:4649597-4648970 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 18-643 |
| Cow position: | chr9:9014099-9014745 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 41-482 |
| Cow position: | chr9:62736756-62736312 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 170 |
| Conread position: | 64-642 |
| Cow position: | chr9:46042176-46041577 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 5 |
| Conread position: | 67-601 |
| Cow position: | chr9:60462842-60462318 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 68-579 |
| Cow position: | chr9:17901503-17900977 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 69-238 |
| Cow position: | chr9:5798736-5798550 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 69-307 |
| Cow position: | chr9:22089578-22089822 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 69-385 |
| Cow position: | chr9:46859401-46859067 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 290 |
| Conread position: | 69-564 |
| Cow position: | chr9:35315819-35315287 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 50 |
| Conread position: | 69-586 |
| Cow position: | chr9:46460989-46460462 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 69-596 |
| Cow position: | chr9:5141773-5142314 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 69-601 |
| Cow position: | chr9:4283028-4283579 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 299 |
| Conread position: | 69-601 |
| Cow position: | chr9:27935438-27936002 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 293 |
| Conread position: | 69-603 |
| Cow position: | chr9:51211742-51212305 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 229 |
| Conread position: | 69-608 |
| Cow position: | chr9:779760-779193 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 195 |
| Conread position: | 69-632 |
| Cow position: | chr9:50791774-50792379 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 69-642 |
| Cow position: | chr9:1250939-1250323 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 300 |
| Conread position: | 69-642 |
| Cow position: | chr9:25034503-25033892 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 293 |
| Conread position: | 69-642 |
| Cow position: | chr9:28679033-28679630 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 275 |
| Conread position: | 69-642 |
| Cow position: | chr9:31065779-31066393 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 216 |
| Conread position: | 69-643 |
| Cow position: | chr9:64015586-64014996 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 69-644 |
| Cow position: | chr9:30827798-30828415 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 301 |
| Conread position: | 72-463 |
| Cow position: | chr9:3963066-3962647 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 285 |
| Conread position: | 73-280 |
| Cow position: | chr9:26736818-26737044 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 66, 198 |
| Conread position: | 73-414 |
| Cow position: | chr9:3764064-3764410 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 233 |
| Conread position: | 73-436 |
| Cow position: | chr9:59481731-59481348 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 282 |
| Conread position: | 73-446 |
| Cow position: | chr9:47003251-47003637 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 166 |
| Conread position: | 73-482 |
| Cow position: | chr9:49303592-49303181 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 73-490 |
| Cow position: | chr9:39730993-39730566 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 155 |
| Conread position: | 73-600 |
| Cow position: | chr9:4533559-4534115 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 73-601 |
| Cow position: | chr9:130099-129574 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 73-601 |
| Cow position: | chr9:828043-827487 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 286 |
| Conread position: | 73-601 |
| Cow position: | chr9:2212203-2212761 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 288 |
| Conread position: | 73-601 |
| Cow position: | chr9:30673440-30674001 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 291 |
| Conread position: | 73-601 |
| Cow position: | chr9:38677209-38677766 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 286 |
| Conread position: | 73-632 |
| Cow position: | chr9:44384325-44384911 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 289 |
| Conread position: | 73-642 |
| Cow position: | chr9:17063318-17062711 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 285 |
| Conread position: | 73-643 |
| Cow position: | chr9:1995325-1994732 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 287 |
| Conread position: | 73-644 |
| Cow position: | chr9:13474706-13474094 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 288 |
| Conread position: | 73-647 |
| Cow position: | chr9:650962-650346 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 220 |
| Conread position: | 74-385 |
| Cow position: | chr9:3167995-3168300 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 74-564 |
| Cow position: | chr9:3936367-3935872 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 334 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 75-643 |
| Cow position: | chr9:37161745-37161142 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 283 |
| Conread position: | 76-462 |
| Cow position: | chr9:4836273-4835871 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 67, 281 |
| Conread position: | 76-601 |
| Cow position: | chr9:24980856-24980326 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 223 |
| Conread position: | 76-644 |
| Cow position: | chr9:3224551-3223976 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 77-601 |
| Cow position: | chr9:8402439-8402976 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 371 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 78-500 |
| Cow position: | chr9:29627687-29627237 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 287 |
| Conread position: | 78-599 |
| Cow position: | chr9:35595009-35594464 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 227 |
| Conread position: | 78-601 |
| Cow position: | chr9:1075119-1074554 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 294 |
| Conread position: | 85-575 |
| Cow position: | chr9:2866892-2866386 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 97-387 |
| Cow position: | chr9:30191294-30190994 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 199 |
| Conread position: | 99-642 |
| Cow position: | chr9:2679360-2679947 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 118-586 |
| Cow position: | chr9:1637973-1638469 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 189 |
| Conread position: | 119-467 |
| Cow position: | chr9:26553697-26554038 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 141-608 |
| Cow position: | chr9:2172087-2172574 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 208 |
| Conread position: | 142-434 |
| Cow position: | chr9:59447652-59447956 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 142-482 |
| Cow position: | chr9:12725141-12725478 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 144-599 |
| Cow position: | chr9:7003870-7004353 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 212 |
| Conread position: | 149-601 |
| Cow position: | chr9:34724664-34725125 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 154-642 |
| Cow position: | chr9:50094081-50093562 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 195 |
| Conread position: | 157-464 |
| Cow position: | chr9:7105268-7104950 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 188 |
| Conread position: | 157-601 |
| Cow position: | chr9:22436132-22436572 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 157-603 |
| Cow position: | chr9:45874686-45875138 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 157-635 |
| Cow position: | chr9:26567764-26568261 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 122 |
| Conread position: | 162-478 |
| Cow position: | chr9:7040760-7041081 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 227, 58 |
| Conread position: | 163-600 |
| Cow position: | chr9:30488772-30489209 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 164-579 |
| Cow position: | chr9:49515306-49514883 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 164-643 |
| Cow position: | chr9:5005151-5005660 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 164-643 |
| Cow position: | chr9:27036082-27036575 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 7 |
| Conread position: | 167-564 |
| Cow position: | chr9:20176542-20176139 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 184 |
| Conread position: | 167-593 |
| Cow position: | chr9:30435755-30436174 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 171-375 |
| Cow position: | chr9:3544055-3544267 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 197 |
| Conread position: | 171-601 |
| Cow position: | chr9:4717358-4717790 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 12 |
| Conread position: | 171-642 |
| Cow position: | chr9:2210931-2211436 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 216 |
| Conread position: | 171-643 |
| Cow position: | chr9:9313938-9313482 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 185-601 |
| Cow position: | chr9:13119100-13118686 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 211, 26 |
| Conread position: | 188-601 |
| Cow position: | chr9:10547853-10548272 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 188-601 |
| Cow position: | chr9:12912969-12913404 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 191-525 |
| Cow position: | chr9:9211834-9211508 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 194-601 |
| Cow position: | chr9:43664916-43665289 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 198-642 |
| Cow position: | chr9:8781708-8781253 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 215-567 |
| Cow position: | chr9:47545423-47545780 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 216-504 |
| Cow position: | chr9:56155787-56155504 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 220-601 |
| Cow position: | chr9:9707361-9707740 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 165, 11 |
| Conread position: | 240-643 |
| Cow position: | chr9:26737164-26737596 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 241-642 |
| Cow position: | chr9:25903775-25904196 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 244-642 |
| Cow position: | chr9:26102008-26101595 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 265, 96 |
| Conread position: | 255-575 |
| Cow position: | chr9:29332516-29332842 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 292-601 |
| Cow position: | chr9:4308060-4307743 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 297-601 |
| Cow position: | chr9:14040850-14040540 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 324-601 |
| Cow position: | chr9:10976448-10976737 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 333-599 |
| Cow position: | chr9:64026778-64027052 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 344-601 |
| Cow position: | chr9:28000873-28001146 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 368-599 |
| Cow position: | chr9:29789305-29789068 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 388-580 |
| Cow position: | chr9:30300830-30300628 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 397-594 |
| Cow position: | chr9:54681338-54681132 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 410-601 |
| Cow position: | chr9:59509737-59509539 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 410-642 |
| Cow position: | chr9:56303028-56302777 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 419-603 |
| Cow position: | chr9:6709391-6709582 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 428-643 |
| Cow position: | chr9:29026481-29026250 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 429-639 |
| Cow position: | chr9:3804796-3805019 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 72, 218 |
| Conread position: | 430-601 |
| Cow position: | chr9:2000705-2000528 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 151 |
| Conread position: | 441-643 |
| Cow position: | chr9:47004186-47004406 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 452-601 |
| Cow position: | chr9:17312845-17312999 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 459-601 |
| Cow position: | chr9:203821-203672 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 485-642 |
| Cow position: | chr9:34769642-34769819 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 502-601 |
| Cow position: | chr9:31090700-31090800 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.