Cow genome map

Conread name: Ss1.1-rspl28_h4.5

Conread position: 782-1003
Cow position: chr12:12295417-12295633 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 36

Conread position: 782-1068
Cow position: chr12:35367285-35367572 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 782-1089
Cow position: chr12:23944034-23944338 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 256, 28

Conread position: 782-1108
Cow position: chr12:45176022-45175712 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 16

Conread position: 783-905
Cow position: chr12:25260632-25260510 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 783-908
Cow position: chr12:21430844-21430969 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 783-908
Cow position: chr12:34051123-34051247 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 783-943
Cow position: chr12:15539679-15539839 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 783-953
Cow position: chr12:1437809-1437979 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 783-958
Cow position: chr12:22518031-22517856 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 783-975
Cow position: chr12:21211629-21211821 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 783-979
Cow position: chr12:36405787-36405591 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 783-988
Cow position: chr12:36213137-36213342 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1010
Cow position: chr12:24029849-24029628 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 71

Conread position: 783-1016
Cow position: chr12:3363824-3364057 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1016
Cow position: chr12:22480115-22479882 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1035
Cow position: chr12:536688-536436 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1040
Cow position: chr12:7961856-7961622 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 75, 32

Conread position: 783-1047
Cow position: chr12:21090891-21090635 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1050
Cow position: chr12:31329736-31329471 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 783-1069
Cow position: chr12:24992942-24992655 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1070
Cow position: chr12:23100156-23099881 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 275, 40

Conread position: 783-1073
Cow position: chr12:46163620-46163912 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1076
Cow position: chr12:1407712-1408000 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 222

Conread position: 783-1077
Cow position: chr12:32986416-32986706 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 87

Conread position: 783-1077
Cow position: chr12:42605295-42605000 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1080
Cow position: chr12:41288218-41288510 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 134, 127

Conread position: 783-1083
Cow position: chr12:758301-758602 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 235

Conread position: 783-1083
Cow position: chr12:4783608-4783312 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 234

Conread position: 783-1083
Cow position: chr12:27853065-27852759 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1083
Cow position: chr12:27993981-27994282 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 149

Conread position: 783-1083
Cow position: chr12:32011901-32011596 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 783-1084
Cow position: chr12:551934-551632 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1084
Cow position: chr12:8675183-8674883 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 783-1084
Cow position: chr12:13259301-13259597 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 158

Conread position: 783-1084
Cow position: chr12:20847019-20847320 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 74

Conread position: 783-1084
Cow position: chr12:21314549-21314247 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1086
Cow position: chr12:21945923-21946219 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 251

Conread position: 783-1089
Cow position: chr12:1006896-1007203 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:1405331-1405636 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 88

Conread position: 783-1089
Cow position: chr12:1491047-1491354 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:1511883-1511576 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:2285152-2285463 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 103, 208

Conread position: 783-1089
Cow position: chr12:3717393-3717086 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position: chr12:5106938-5107245 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:5328029-5327722 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:6106466-6106161 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:8137100-8136803 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 271, 58

Conread position: 783-1089
Cow position: chr12:8641659-8641966 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:8773546-8773854 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 783-1089
Cow position: chr12:10358576-10358883 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:10930957-10931272 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 241

Conread position: 783-1089
Cow position: chr12:11101129-11101435 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 232

Conread position: 783-1089
Cow position: chr12:12755274-12754969 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:12929023-12928719 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 15

Conread position: 783-1089
Cow position: chr12:20459838-20459532 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 254

Conread position: 783-1089
Cow position: chr12:20994878-20994577 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 57

Conread position: 783-1089
Cow position: chr12:21201691-21201979 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 165

Conread position: 783-1089
Cow position: chr12:21610474-21610791 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 158

Conread position: 783-1089
Cow position: chr12:21665017-21665323 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 57

Conread position: 783-1089
Cow position: chr12:21904251-21904554 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 25

Conread position: 783-1089
Cow position: chr12:22202787-22202479 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 290

Conread position: 783-1089
Cow position: chr12:22593637-22593952 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 156

Conread position: 783-1089
Cow position: chr12:22748095-22748402 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:23138448-23138141 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 783-1089
Cow position: chr12:24696427-24696733 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:24980602-24980908 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 289

Conread position: 783-1089
Cow position: chr12:25097383-25097078 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 180

Conread position: 783-1089
Cow position: chr12:25148737-25148430 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:25266452-25266146 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 213

Conread position: 783-1089
Cow position: chr12:27506768-27506462 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 180

Conread position: 783-1089
Cow position: chr12:27929911-27929604 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position: chr12:27958645-27958338 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:28764118-28763811 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 116

Conread position: 783-1089
Cow position: chr12:30501521-30501828 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 783-1089
Cow position: chr12:30686621-30686929 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 783-1089
Cow position: chr12:32656435-32656736 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 155

Conread position: 783-1089
Cow position: chr12:32757577-32757884 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position: chr12:34176245-34176552 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:35161488-35161795 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:35162644-35162951 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:35548246-35547941 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:37561889-37562194 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 783-1089
Cow position: chr12:38893243-38893551 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 783-1089
Cow position: chr12:39930049-39930356 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position: chr12:41338349-41338045 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 109

Conread position: 783-1089
Cow position: chr12:42232190-42232497 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position: chr12:42856650-42856344 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1106
Cow position: chr12:21392143-21391818 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 222

Conread position: 783-1107
Cow position: chr12:1775036-1774713 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 265, 155

Conread position: 783-1108
Cow position: chr12:17968869-17969194 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 74

Conread position: 783-1108
Cow position: chr12:19155968-19155653 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 54

Conread position: 783-1108
Cow position: chr12:21719291-21718971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 47

Conread position: 783-1108
Cow position: chr12:47803057-47803379 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 59

Conread position: 783-1112
Cow position: chr12:42797893-42798218 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 186, 17

Conread position: 783-1118
Cow position: chr12:1476778-1476445 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 166

Conread position: 783-1124
Cow position: chr12:19871095-19871434 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 162

Conread position: 784-1033
Cow position: chr12:47168011-47168257 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 105

Conread position: 784-1084
Cow position: chr12:17981301-17981591 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 784-1089
Cow position: chr12:62326-62020 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 784-1089
Cow position: chr12:21074719-21075023 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 115

Conread position: 784-1089
Cow position: chr12:31027939-31027632 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 784-1092
Cow position: chr12:3094741-3094444 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 105

Conread position: 785-1006
Cow position: chr12:36204634-36204857 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 53

Conread position: 785-1026
Cow position: chr12:1469242-1469001 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 785-1089
Cow position: chr12:1056625-1056320 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 785-1089
Cow position: chr12:14568932-14568627 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 785-1089
Cow position: chr12:17718183-17718488 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 785-1092
Cow position: chr12:542533-542227 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 26

Conread position: 786-1066
Cow position: chr12:42194518-42194798 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 786-1076
Cow position: chr12:250429-250136 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 786-1089
Cow position: chr12:1886468-1886171 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 786-1089
Cow position: chr12:42558169-42557877 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 268, 85

Conread position: 787-1084
Cow position: chr12:32066449-32066742 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 134, 120

Conread position: 788-1084
Cow position: chr12:487557-487849 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 270, 12

Conread position: 789-1009
Cow position: chr12:22253500-22253716 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 24

Conread position: 790-997
Cow position: chr12:19861574-19861781 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 790-1084
Cow position: chr12:17662862-17663145 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 215, 59

Conread position: 791-1077
Cow position: chr12:10445299-10445561 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 796-1089
Cow position: chr12:8626204-8626490 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 125, 114

Conread position: 796-1089
Cow position: chr12:8628300-8628014 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 125, 114

Conread position: 797-1088
Cow position: chr12:26870202-26870495 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 210

Conread position: 797-1089
Cow position: chr12:19197943-19198223 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 78

Conread position: 801-1089
Cow position: chr12:27614314-27614603 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 801-1111
Cow position: chr12:1107941-1108247 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 85

Conread position: 802-1004
Cow position: chr12:1500048-1500246 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 8

Conread position: 802-1087
Cow position: chr12:10486380-10486654 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 233, 52

Conread position: 802-1089
Cow position: chr12:1174108-1173822 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 119, 30

Conread position: 802-1089
Cow position: chr12:45144957-45145240 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 39

Conread position: 803-1108
Cow position: chr12:23159611-23159296 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 212, 35

Conread position: 804-1084
Cow position: chr12:18585574-18585855 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 804-1094
Cow position: chr12:21484314-21484604 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 139

Conread position: 806-964
Cow position: chr12:21658716-21658871 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 806-1084
Cow position: chr12:22565941-22566217 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 808-1084
Cow position: chr12:19040519-19040796 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 808-1089
Cow position: chr12:5712868-5713151 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 813-1076
Cow position: chr12:21129961-21130216 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 223, 77

Conread position: 813-1084
Cow position: chr12:32220008-32220282 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 26

Conread position: 813-1088
Cow position: chr12:32848487-32848754 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 241, 11

Conread position: 813-1130
Cow position: chr12:21705960-21705651 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 123

Conread position: 814-1108
Cow position: chr12:23491820-23491528 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 157

Conread position: 816-1116
Cow position: chr12:21862512-21862217 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 817-1108
Cow position: chr12:21251397-21251108 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 828-1112
Cow position: chr12:8842126-8841845 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 95

Conread position: 838-1089
Cow position: chr12:8839187-8839441 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 840-1076
Cow position: chr12:20334491-20334718 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 202, 48

Conread position: 844-1089
Cow position: chr12:48416803-48416559 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 851-1089
Cow position: chr12:19971712-19971952 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 203, 51

Conread position: 853-1089
Cow position: chr12:5777179-5776942 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 854-1089
Cow position: chr12:15230979-15231222 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 857-1069
Cow position: chr12:35473581-35473368 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 857-1087
Cow position: chr12:23521208-23520977 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 857-1089
Cow position: chr12:9988733-9988499 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 860-1108
Cow position: chr12:16438982-16439232 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 166

Conread position: 863-1060
Cow position: chr12:9926524-9926715 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 864-1089
Cow position: chr12:32105599-32105826 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 865-1027
Cow position: chr12:18546910-18547072 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 865-1076
Cow position: chr12:11582133-11582344 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 189, 60

Conread position: 872-1089
Cow position: chr12:21303398-21303616 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 874-1073
Cow position: chr12:15695739-15695539 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 137

Conread position: 874-1089
Cow position: chr12:6441866-6441654 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 180, 33

Conread position: 874-1089
Cow position: chr12:15925780-15925564 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 874-1108
Cow position: chr12:15939890-15939655 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 180, 0

Conread position: 875-1016
Cow position: chr12:1219897-1220038 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 876-1083
Cow position: chr12:3180389-3180596 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 181, 105

Conread position: 878-1082
Cow position: chr12:1343430-1343634 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 180, 65

Conread position: 885-1089
Cow position: chr12:23512196-23511990 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 0

Conread position: 885-1089
Cow position: chr12:36288030-36287825 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 169, 0

Conread position: 887-1089
Cow position: chr12:33925713-33925510 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 167, 0

Conread position: 887-1108
Cow position: chr12:40306281-40306505 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 83

Conread position: 889-1089
Cow position: chr12:25313727-25313526 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 108

Conread position: 891-1089
Cow position: chr12:28737514-28737713 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 0

Conread position: 901-1089
Cow position: chr12:16302340-16302151 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 901-1091
Cow position: chr12:43681003-43681194 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 153, 0

Conread position: 914-1089
Cow position: chr12:29128350-29128175 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 914-1089
Cow position: chr12:32147616-32147442 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 140, 114

Conread position: 914-1108
Cow position: chr12:2242973-2242781 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 916-1077
Cow position: chr12:46112104-46111942 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 142, 0

Conread position: 920-1084
Cow position: chr12:23152716-23152553 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 133, 100

Conread position: 923-1084
Cow position: chr12:24557600-24557762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 132

Conread position: 927-1077
Cow position: chr12:28013207-28013056 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 928-1089
Cow position: chr12:258755-258917 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 928-1089
Cow position: chr12:5111035-5110873 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 928-1089
Cow position: chr12:21010453-21010291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 928-1089
Cow position: chr12:31829424-31829262 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 126, 0

Conread position: 928-1089
Cow position: chr12:32340231-32340069 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 0

Conread position: 932-1089
Cow position: chr12:34514622-34514464 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 933-1089
Cow position: chr12:7673932-7674089 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 936-1089
Cow position: chr12:22517818-22517665 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 130

Conread position: 937-1089
Cow position: chr12:14423384-14423537 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 942-1089
Cow position: chr12:32088306-32088454 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 944-1089
Cow position: chr12:21889001-21888855 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 946-1089
Cow position: chr12:21211826-21211971 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 956-1089
Cow position: chr12:5226302-5226436 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 965-1089
Cow position: chr12:1437972-1438097 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 967-1089
Cow position: chr12:32900856-32900979 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 972-1089
Cow position: chr12:1789575-1789457 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.