Cow genome map

Conread name: Ss1.1-rspl28_h4.5

Conread position: 777-1089
Cow position:
Alignm length: 315
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 171, 192

Conread position: 778-1108
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 269, 13

Conread position: 782-1048
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 782-1068
Cow position:
Alignm length: 288
Alignm identity: 186
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 274, 42

Conread position: 782-1073
Cow position:
Alignm length: 293
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 272, 16

Conread position: 782-1084
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 92

Conread position: 782-1084
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 224, 0

Conread position: 782-1089
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 139, 125

Conread position: 783-975
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 145

Conread position: 783-979
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 783-1004
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 108, 0

Conread position: 783-1016
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 130, 0

Conread position: 783-1030
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 25

Conread position: 783-1034
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 783-1034
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 783-1035
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 783-1056
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 37, 88

Conread position: 783-1056
Cow position:
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1060
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 85

Conread position: 783-1060
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1060
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 169, 124

Conread position: 783-1064
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 229

Conread position: 783-1064
Cow position:
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 783-1074
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 783-1077
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1084
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 108

Conread position: 783-1084
Cow position:
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 102

Conread position: 783-1084
Cow position:
Alignm length: 302
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 270, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 254

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 131

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 85

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 20

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 196

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 71

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 201

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 37

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 102

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 783-1089
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 97

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 124

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 783-1089
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 783-1089
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 783-1092
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 143

Conread position: 783-1094
Cow position:
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 783-1106
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 310

Conread position: 783-1108
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 109

Conread position: 783-1108
Cow position:
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 191

Conread position: 783-1108
Cow position:
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 36

Conread position: 783-1108
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 55

Conread position: 783-1108
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 88

Conread position: 783-1112
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 282, 71

Conread position: 783-1113
Cow position:
Alignm length: 332
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 275, 26

Conread position: 783-1125
Cow position:
Alignm length: 362
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 783-1139
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 232

Conread position: 784-1077
Cow position:
Alignm length: 296
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 785-1076
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 785-1076
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 93

Conread position: 785-1084
Cow position:
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 59

Conread position: 785-1084
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 785-1089
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 127

Conread position: 785-1089
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 273, 195

Conread position: 786-1031
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 786-1081
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 272, 69

Conread position: 786-1125
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 122

Conread position: 789-1107
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 8

Conread position: 793-935
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 120

Conread position: 793-1110
Cow position:
Alignm length: 321
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 152

Conread position: 794-1089
Cow position:
Alignm length: 297
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 259, 224

Conread position: 797-1089
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 26

Conread position: 797-1140
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 90

Conread position: 800-1089
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 65

Conread position: 801-1084
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 55

Conread position: 802-1089
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 802-1089
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 802-1089
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 71

Conread position: 802-1089
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 176

Conread position: 802-1089
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 235, 68

Conread position: 802-1093
Cow position:
Alignm length: 294
Alignm identity: 189
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 194, 78

Conread position: 803-1083
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 201, 157

Conread position: 803-1089
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 126

Conread position: 804-1089
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 805-1003
Cow position:
Alignm length: 200
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 9

Conread position: 805-1087
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 41

Conread position: 805-1113
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 808-1089
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 64

Conread position: 813-949
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 814-1089
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 243, 43

Conread position: 815-1083
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 237, 69

Conread position: 816-1089
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 816-1089
Cow position:
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 28

Conread position: 820-1000
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 822-1054
Cow position:
Alignm length: 234
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 125, 148

Conread position: 822-1089
Cow position:
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 85

Conread position: 825-1083
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 208, 99

Conread position: 825-1089
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 229, 0

Conread position: 828-1095
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 125

Conread position: 832-1084
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 63

Conread position: 835-1106
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 137, 5

Conread position: 836-1089
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 836-1118
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 839-1089
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 72

Conread position: 840-1089
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 850-1042
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 850-1075
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 207, 0

Conread position: 852-1089
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 854-1089
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 199, 20

Conread position: 854-1140
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 245

Conread position: 855-1089
Cow position:
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 857-1089
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 53

Conread position: 858-1089
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 143, 105

Conread position: 864-1084
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 108

Conread position: 874-1033
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 13

Conread position: 874-1084
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 136, 0

Conread position: 874-1089
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 15

Conread position: 875-1089
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 879-1031
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 880-1084
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 12

Conread position: 880-1089
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 27

Conread position: 889-1089
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 21

Conread position: 895-1049
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 914-1083
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 90

Conread position: 914-1089
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 915-1076
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 920-1084
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 920-1089
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 927-1108
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 131, 61

Conread position: 928-1089
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 100

Conread position: 928-1089
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 57

Conread position: 929-1108
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 41

Conread position: 945-1095
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 112, 147

Conread position: 952-1089
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.