Cow genome map
| Conread name: | Ss1.1-rspl28_h4.5 |
| Conread position: | 777-1089 |
| Cow position: | chr25:26753656-26753343 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 171, 192 |
| Conread position: | 778-1108 |
| Cow position: | chr25:25731210-25731534 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 269, 13 |
| Conread position: | 782-1048 |
| Cow position: | chr25:17554802-17554533 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 782-1068 |
| Cow position: | chr25:30326845-30326563 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 274, 42 |
| Conread position: | 782-1073 |
| Cow position: | chr25:23462052-23462338 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 272, 16 |
| Conread position: | 782-1084 |
| Cow position: | chr25:9395088-9395387 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 92 |
| Conread position: | 782-1084 |
| Cow position: | chr25:21967838-21968152 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 782-1089 |
| Cow position: | chr25:26754954-26755259 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 139, 125 |
| Conread position: | 783-975 |
| Cow position: | chr25:39554955-39554766 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 173, 145 |
| Conread position: | 783-979 |
| Cow position: | chr25:12083160-12082970 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 783-1004 |
| Cow position: | chr25:18179692-18179912 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 783-1016 |
| Cow position: | chr25:24449567-24449336 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 783-1030 |
| Cow position: | chr25:30341049-30340801 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 783-1034 |
| Cow position: | chr25:16923463-16923220 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 783-1034 |
| Cow position: | chr25:22150746-22150998 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 783-1035 |
| Cow position: | chr25:33990575-33990326 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 783-1056 |
| Cow position: | chr25:1973009-1972735 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 783-1056 |
| Cow position: | chr25:34673902-34673628 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 783-1060 |
| Cow position: | chr25:18071907-18072179 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 133, 85 |
| Conread position: | 783-1060 |
| Cow position: | chr25:29526191-29525913 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1060 |
| Cow position: | chr25:35561827-35561551 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 169, 124 |
| Conread position: | 783-1064 |
| Cow position: | chr25:34368803-34369084 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 229 |
| Conread position: | 783-1064 |
| Cow position: | chr25:39387306-39387588 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 783-1074 |
| Cow position: | chr25:28421027-28420737 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 783-1077 |
| Cow position: | chr25:36350410-36350705 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1084 |
| Cow position: | chr25:392944-393241 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 108 |
| Conread position: | 783-1084 |
| Cow position: | chr25:18190700-18190401 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 102 |
| Conread position: | 783-1084 |
| Cow position: | chr25:36511980-36512278 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:7223761-7223455 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 254 |
| Conread position: | 783-1089 |
| Cow position: | chr25:10634335-10634029 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 783-1089 |
| Cow position: | chr25:11043293-11043598 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 85 |
| Conread position: | 783-1089 |
| Cow position: | chr25:12939537-12939230 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:13942058-13941761 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 783-1089 |
| Cow position: | chr25:13959741-13960044 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 196 |
| Conread position: | 783-1089 |
| Cow position: | chr25:18886797-18886504 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 71 |
| Conread position: | 783-1089 |
| Cow position: | chr25:19337651-19337348 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 201 |
| Conread position: | 783-1089 |
| Cow position: | chr25:22197716-22197409 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:23740572-23740268 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 37 |
| Conread position: | 783-1089 |
| Cow position: | chr25:24007578-24007885 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:24655499-24655192 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 783-1089 |
| Cow position: | chr25:26281695-26282002 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:27019567-27019260 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 783-1089 |
| Cow position: | chr25:28862541-28862849 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:32577993-32577685 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 783-1089 |
| Cow position: | chr25:34257436-34257129 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:34503559-34503245 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:34509509-34509202 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:35553354-35553647 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 124 |
| Conread position: | 783-1089 |
| Cow position: | chr25:35568214-35567906 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:35571490-35571796 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:35755573-35755266 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:40390040-40389756 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr25:41098526-41098214 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 783-1092 |
| Cow position: | chr25:2594448-2594752 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 143 |
| Conread position: | 783-1094 |
| Cow position: | chr25:25480938-25480616 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 0 |
| Conread position: | 783-1106 |
| Cow position: | chr25:26781412-26781089 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 310 |
| Conread position: | 783-1108 |
| Cow position: | chr25:10136494-10136820 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 109 |
| Conread position: | 783-1108 |
| Cow position: | chr25:21949469-21949794 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 191 |
| Conread position: | 783-1108 |
| Cow position: | chr25:25826125-25826444 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 36 |
| Conread position: | 783-1108 |
| Cow position: | chr25:33838051-33838379 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 55 |
| Conread position: | 783-1108 |
| Cow position: | chr25:41136063-41135747 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 88 |
| Conread position: | 783-1112 |
| Cow position: | chr25:37648121-37648432 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 282, 71 |
| Conread position: | 783-1113 |
| Cow position: | chr25:34494481-34494153 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 275, 26 |
| Conread position: | 783-1125 |
| Cow position: | chr25:25109357-25108999 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 333 |
| Conread position: | 783-1139 |
| Cow position: | chr25:33688549-33688191 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 232 |
| Conread position: | 784-1077 |
| Cow position: | chr25:17586348-17586055 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 785-1076 |
| Cow position: | chr25:20633439-20633733 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 785-1076 |
| Cow position: | chr25:37468517-37468806 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 785-1084 |
| Cow position: | chr25:20495244-20495541 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 59 |
| Conread position: | 785-1084 |
| Cow position: | chr25:41120679-41120981 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 785-1089 |
| Cow position: | chr25:3373970-3373661 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 127 |
| Conread position: | 785-1089 |
| Cow position: | chr25:22431426-22431729 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 273, 195 |
| Conread position: | 786-1031 |
| Cow position: | chr25:18423387-18423626 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 786-1081 |
| Cow position: | chr25:23773568-23773280 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 272, 69 |
| Conread position: | 786-1125 |
| Cow position: | chr25:17657298-17657632 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 789-1107 |
| Cow position: | chr25:17561725-17562042 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 8 |
| Conread position: | 793-935 |
| Cow position: | chr25:12834900-12834758 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 793-1110 |
| Cow position: | chr25:33027574-33027263 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 132, 152 |
| Conread position: | 794-1089 |
| Cow position: | chr25:23673180-23672886 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 259, 224 |
| Conread position: | 797-1089 |
| Cow position: | chr25:24460018-24459719 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 797-1140 |
| Cow position: | chr25:33575041-33574698 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 800-1089 |
| Cow position: | chr25:21543010-21543299 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 162, 65 |
| Conread position: | 801-1084 |
| Cow position: | chr25:39141510-39141781 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 802-1089 |
| Cow position: | chr25:10704145-10704434 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr25:18489753-18490043 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr25:20772642-20772349 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 802-1089 |
| Cow position: | chr25:23999488-23999206 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 176 |
| Conread position: | 802-1089 |
| Cow position: | chr25:24670878-24670592 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 235, 68 |
| Conread position: | 802-1093 |
| Cow position: | chr25:27534018-27533727 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 194, 78 |
| Conread position: | 803-1083 |
| Cow position: | chr25:1025760-1025474 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 201, 157 |
| Conread position: | 803-1089 |
| Cow position: | chr25:26913927-26914211 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 126 |
| Conread position: | 804-1089 |
| Cow position: | chr25:29803054-29802768 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 805-1003 |
| Cow position: | chr25:34670725-34670527 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 805-1087 |
| Cow position: | chr25:11665369-11665651 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 41 |
| Conread position: | 805-1113 |
| Cow position: | chr25:26930787-26931097 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 808-1089 |
| Cow position: | chr25:29313619-29313342 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 813-949 |
| Cow position: | chr25:29134396-29134261 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 814-1089 |
| Cow position: | chr25:12865489-12865756 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 243, 43 |
| Conread position: | 815-1083 |
| Cow position: | chr25:24205405-24205138 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 237, 69 |
| Conread position: | 816-1089 |
| Cow position: | chr25:8875837-8875562 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 816-1089 |
| Cow position: | chr25:26354080-26353807 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 28 |
| Conread position: | 820-1000 |
| Cow position: | chr25:20368773-20368964 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 822-1054 |
| Cow position: | chr25:41408318-41408550 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 125, 148 |
| Conread position: | 822-1089 |
| Cow position: | chr25:450077-449813 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 85 |
| Conread position: | 825-1083 |
| Cow position: | chr25:33207564-33207307 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 208, 99 |
| Conread position: | 825-1089 |
| Cow position: | chr25:3172687-3172422 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 828-1095 |
| Cow position: | chr25:17339512-17339234 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 81, 125 |
| Conread position: | 832-1084 |
| Cow position: | chr25:18208963-18208713 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 835-1106 |
| Cow position: | chr25:35626509-35626237 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 137, 5 |
| Conread position: | 836-1089 |
| Cow position: | chr25:25509596-25509850 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 836-1118 |
| Cow position: | chr25:23326303-23326020 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 839-1089 |
| Cow position: | chr25:24228760-24228502 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 197, 72 |
| Conread position: | 840-1089 |
| Cow position: | chr25:11896345-11896595 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 850-1042 |
| Cow position: | chr25:23912771-23912962 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 850-1075 |
| Cow position: | chr25:41357060-41356834 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 852-1089 |
| Cow position: | chr25:17904378-17904617 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 854-1089 |
| Cow position: | chr25:40657276-40657502 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 199, 20 |
| Conread position: | 854-1140 |
| Cow position: | chr25:9958310-9958021 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 245 |
| Conread position: | 855-1089 |
| Cow position: | chr25:26706140-26705905 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 857-1089 |
| Cow position: | chr25:24637399-24637167 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 858-1089 |
| Cow position: | chr25:23361225-23361467 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 143, 105 |
| Conread position: | 864-1084 |
| Cow position: | chr25:21071107-21070884 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 874-1033 |
| Cow position: | chr25:2369610-2369769 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 874-1084 |
| Cow position: | chr25:27536251-27536046 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 874-1089 |
| Cow position: | chr25:24303503-24303288 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 161, 15 |
| Conread position: | 875-1089 |
| Cow position: | chr25:31073834-31073619 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 879-1031 |
| Cow position: | chr25:16801245-16801397 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 880-1084 |
| Cow position: | chr25:18264964-18265169 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 174, 12 |
| Conread position: | 880-1089 |
| Cow position: | chr25:11955598-11955808 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 889-1089 |
| Cow position: | chr25:21903227-21903427 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 895-1049 |
| Cow position: | chr25:4373042-4372888 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 914-1083 |
| Cow position: | chr25:20073464-20073638 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 914-1089 |
| Cow position: | chr25:19139771-19139595 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 915-1076 |
| Cow position: | chr25:26922644-26922806 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 920-1084 |
| Cow position: | chr25:35040076-35039911 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 920-1089 |
| Cow position: | chr25:14962056-14961881 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 927-1108 |
| Cow position: | chr25:23393687-23393869 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 131, 61 |
| Conread position: | 928-1089 |
| Cow position: | chr25:13430292-13430132 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 100 |
| Conread position: | 928-1089 |
| Cow position: | chr25:13786790-13786951 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 929-1108 |
| Cow position: | chr25:19367879-19367699 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 945-1095 |
| Cow position: | chr25:14756577-14756427 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 112, 147 |
| Conread position: | 952-1089 |
| Cow position: | chr25:6475615-6475477 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.