Cow genome map

Conread name: Ss1.1-rspl28_h4.5

Conread position: 293-1077
Cow position:
Alignm length: 786
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 761, 0

Conread position: 782-935
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 782-1082
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 207, 162

Conread position: 782-1089
Cow position:
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 121

Conread position: 782-1089
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 283

Conread position: 782-1108
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 188

Conread position: 782-1113
Cow position:
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 45

Conread position: 783-908
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 783-935
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 783-944
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 783-988
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1002
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 207, 216

Conread position: 783-1010
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 783-1010
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 783-1033
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1036
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 783-1040
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 783-1044
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1044
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 148, 17

Conread position: 783-1051
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1057
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 783-1076
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1076
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 251, 246

Conread position: 783-1077
Cow position:
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1080
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 74

Conread position: 783-1083
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1083
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 272

Conread position: 783-1084
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 100

Conread position: 783-1084
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1084
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1088
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 208

Conread position: 783-1089
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 148

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 108

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 124

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 88

Conread position: 783-1089
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 783-1089
Cow position:
Alignm length: 322
Alignm identity: 210
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 227

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 128

Conread position: 783-1089
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 43

Conread position: 783-1089
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 104

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 253

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 783-1090
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 238

Conread position: 783-1094
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 272, 41

Conread position: 783-1108
Cow position:
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 316

Conread position: 783-1108
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1108
Cow position:
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 310

Conread position: 783-1108
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 30

Conread position: 783-1108
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 309

Conread position: 783-1108
Cow position:
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 309

Conread position: 783-1121
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 187, 134

Conread position: 784-1074
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 248

Conread position: 784-1113
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 206

Conread position: 785-947
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 785-1016
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 785-1069
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 117

Conread position: 785-1075
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 72

Conread position: 785-1084
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 261, 40

Conread position: 785-1084
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 785-1089
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 183

Conread position: 785-1089
Cow position:
Alignm length: 308
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 41

Conread position: 785-1089
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 53

Conread position: 785-1089
Cow position:
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 174

Conread position: 785-1094
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 177, 98

Conread position: 785-1108
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 11

Conread position: 786-1089
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 256, 71

Conread position: 786-1094
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 121, 52

Conread position: 787-1089
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 787-1089
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 145

Conread position: 796-1040
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 101

Conread position: 796-1077
Cow position:
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 799-1089
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 221

Conread position: 800-1083
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 238, 14

Conread position: 802-1084
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 252, 55

Conread position: 802-1087
Cow position:
Alignm length: 291
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 119, 73

Conread position: 802-1089
Cow position:
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 175

Conread position: 804-1084
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 53

Conread position: 810-967
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 814-1067
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 190, 170

Conread position: 817-1068
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 174

Conread position: 817-1084
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 128

Conread position: 817-1084
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 53

Conread position: 819-1089
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 143, 0

Conread position: 820-1025
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 820-1089
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 95

Conread position: 822-1089
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 234, 25

Conread position: 828-1140
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 69

Conread position: 831-1076
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 832-1077
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 832-1082
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 206, 161

Conread position: 832-1089
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 39

Conread position: 834-1089
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 34

Conread position: 835-1108
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 219, 110

Conread position: 836-1082
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 0

Conread position: 837-1118
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 841-1056
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 844-1016
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 851-1076
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 203, 140

Conread position: 854-1089
Cow position:
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 855-1089
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 856-1084
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 100, 188

Conread position: 857-1087
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 72

Conread position: 857-1089
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 858-1089
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 199, 224

Conread position: 861-1069
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 102

Conread position: 868-1089
Cow position:
Alignm length: 222
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 877-1083
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 125

Conread position: 884-1089
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 885-1089
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 169, 99

Conread position: 895-1139
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 0

Conread position: 916-1089
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 920-1089
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 134, 49

Conread position: 924-1077
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 111, 106

Conread position: 925-1089
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 927-1089
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 139

Conread position: 927-1110
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 928-1084
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 944-1113
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 945-1089
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 109, 28

Conread position: 953-1075
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 57

Conread position: 966-1088
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.