Cow genome map
| Conread name: | Ss1.1-rspl28_h4.5 |
| Conread position: | 503-1089 |
| Cow position: | chr27:19487605-19488192 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 551, 0 |
| Conread position: | 773-1089 |
| Cow position: | chr27:22797785-22797469 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 62 |
| Conread position: | 781-977 |
| Cow position: | chr27:22723236-22723430 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 782-1056 |
| Cow position: | chr27:6380353-6380079 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 204, 199 |
| Conread position: | 782-1077 |
| Cow position: | chr27:14297098-14297383 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 88 |
| Conread position: | 782-1083 |
| Cow position: | chr27:25801325-25801022 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 782-1089 |
| Cow position: | chr27:2000725-2001033 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 295 |
| Conread position: | 782-1089 |
| Cow position: | chr27:5913819-5914121 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 46 |
| Conread position: | 782-1089 |
| Cow position: | chr27:25799140-25799445 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 275, 38 |
| Conread position: | 782-1089 |
| Cow position: | chr27:26329813-26330120 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 783-908 |
| Cow position: | chr27:773656-773781 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-908 |
| Cow position: | chr27:18697222-18697347 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-908 |
| Cow position: | chr27:20716775-20716900 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-938 |
| Cow position: | chr27:22329095-22329250 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-963 |
| Cow position: | chr27:9332628-9332808 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 783-979 |
| Cow position: | chr27:22742533-22742337 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1016 |
| Cow position: | chr27:29447195-29446962 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1035 |
| Cow position: | chr27:30035696-30035950 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 176, 84 |
| Conread position: | 783-1044 |
| Cow position: | chr27:7911864-7912122 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 783-1048 |
| Cow position: | chr27:10379068-10379332 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 783-1048 |
| Cow position: | chr27:13900775-13901040 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1050 |
| Cow position: | chr27:22648025-22647758 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1076 |
| Cow position: | chr27:8726464-8726753 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 254, 58 |
| Conread position: | 783-1077 |
| Cow position: | chr27:21204321-21204032 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 158, 57 |
| Conread position: | 783-1077 |
| Cow position: | chr27:27665882-27666183 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 783-1083 |
| Cow position: | chr27:5925154-5925455 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 783-1084 |
| Cow position: | chr27:10578827-10579130 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 783-1084 |
| Cow position: | chr27:12749914-12750208 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 102 |
| Conread position: | 783-1084 |
| Cow position: | chr27:15273191-15272885 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 783-1084 |
| Cow position: | chr27:19523827-19523525 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 96 |
| Conread position: | 783-1084 |
| Cow position: | chr27:24571921-24571622 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 138, 81 |
| Conread position: | 783-1084 |
| Cow position: | chr27:26855947-26856241 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 86 |
| Conread position: | 783-1089 |
| Cow position: | chr27:166036-165731 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 783-1089 |
| Cow position: | chr27:1082281-1081974 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:1520561-1520868 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:1536062-1536358 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 270, 155 |
| Conread position: | 783-1089 |
| Cow position: | chr27:3759754-3760056 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 783-1089 |
| Cow position: | chr27:4331859-4331552 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:4982253-4982560 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 783-1089 |
| Cow position: | chr27:5984149-5983842 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:8960148-8959841 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:9255255-9254954 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 783-1089 |
| Cow position: | chr27:15543896-15544203 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:15634453-15634154 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 127 |
| Conread position: | 783-1089 |
| Cow position: | chr27:16031516-16031209 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:17422473-17422772 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 783-1089 |
| Cow position: | chr27:20810302-20810609 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:24296386-24296081 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 783-1089 |
| Cow position: | chr27:26784703-26785010 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:27045064-27045365 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 783-1089 |
| Cow position: | chr27:29036488-29036192 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 219 |
| Conread position: | 783-1089 |
| Cow position: | chr27:29811212-29811515 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 148 |
| Conread position: | 783-1089 |
| Cow position: | chr27:31268107-31268404 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 271, 96 |
| Conread position: | 783-1090 |
| Cow position: | chr27:27235224-27234915 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 127 |
| Conread position: | 783-1094 |
| Cow position: | chr27:27556689-27556999 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 130 |
| Conread position: | 783-1106 |
| Cow position: | chr27:8426739-8427061 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 783-1108 |
| Cow position: | chr27:21451326-21451651 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 253 |
| Conread position: | 783-1121 |
| Cow position: | chr27:12146762-12146423 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 783-1131 |
| Cow position: | chr27:31249127-31249473 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 250, 150 |
| Conread position: | 784-1089 |
| Cow position: | chr27:1501443-1501713 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 273, 73 |
| Conread position: | 784-1089 |
| Cow position: | chr27:15374703-15375002 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 784-1118 |
| Cow position: | chr27:23075064-23074729 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 265, 126 |
| Conread position: | 785-919 |
| Cow position: | chr27:15034210-15034077 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 785-1016 |
| Cow position: | chr27:30571716-30571943 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 785-1076 |
| Cow position: | chr27:9990326-9990020 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 785-1077 |
| Cow position: | chr27:25965073-25964783 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 271, 110 |
| Conread position: | 785-1089 |
| Cow position: | chr27:6030657-6030956 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 269, 47 |
| Conread position: | 785-1090 |
| Cow position: | chr27:3232651-3232345 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 785-1137 |
| Cow position: | chr27:27193478-27193129 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 31 |
| Conread position: | 786-1089 |
| Cow position: | chr27:30584275-30583978 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 269, 14 |
| Conread position: | 786-1108 |
| Cow position: | chr27:15405533-15405835 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 98 |
| Conread position: | 787-1063 |
| Cow position: | chr27:25971715-25971441 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 788-1075 |
| Cow position: | chr27:10282832-10283119 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 266, 249 |
| Conread position: | 788-1081 |
| Cow position: | chr27:25984103-25984388 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 791-916 |
| Cow position: | chr27:8591955-8592078 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 794-1089 |
| Cow position: | chr27:27849162-27849458 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 796-1089 |
| Cow position: | chr27:21284335-21284046 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 97 |
| Conread position: | 797-1082 |
| Cow position: | chr27:17567998-17568283 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 85 |
| Conread position: | 800-1089 |
| Cow position: | chr27:8972344-8972632 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 7 |
| Conread position: | 801-1089 |
| Cow position: | chr27:2558092-2557803 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 0 |
| Conread position: | 802-952 |
| Cow position: | chr27:26599813-26599963 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 802-1084 |
| Cow position: | chr27:25873540-25873816 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 204 |
| Conread position: | 802-1089 |
| Cow position: | chr27:1188555-1188854 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr27:5991140-5990858 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr27:13308544-13308832 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr27:13353206-13353494 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 802-1089 |
| Cow position: | chr27:23318033-23317754 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 804-1048 |
| Cow position: | chr27:16788538-16788286 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 807-1084 |
| Cow position: | chr27:21342434-21342711 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 55 |
| Conread position: | 811-1089 |
| Cow position: | chr27:16427573-16427851 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 814-1089 |
| Cow position: | chr27:27291299-27291577 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 816-1089 |
| Cow position: | chr27:31547634-31547349 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 224 |
| Conread position: | 816-1113 |
| Cow position: | chr27:11434090-11434387 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 175 |
| Conread position: | 817-1016 |
| Cow position: | chr27:4978511-4978708 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 149, 39 |
| Conread position: | 817-1069 |
| Cow position: | chr27:23905719-23905972 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 198, 111 |
| Conread position: | 817-1084 |
| Cow position: | chr27:8068380-8068109 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 818-1056 |
| Cow position: | chr27:1845961-1845724 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 201 |
| Conread position: | 819-1054 |
| Cow position: | chr27:15926002-15925767 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 824-1089 |
| Cow position: | chr27:28051848-28051596 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 827-1089 |
| Cow position: | chr27:8200863-8201126 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 137 |
| Conread position: | 834-1087 |
| Cow position: | chr27:28894940-28895189 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 135, 92 |
| Conread position: | 838-1089 |
| Cow position: | chr27:4768371-4768623 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 844-1089 |
| Cow position: | chr27:526156-525911 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 133 |
| Conread position: | 844-1089 |
| Cow position: | chr27:11489580-11489830 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 845-1108 |
| Cow position: | chr27:27278669-27278918 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 854-1066 |
| Cow position: | chr27:219849-219645 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 855-1076 |
| Cow position: | chr27:12281652-12281873 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 199, 20 |
| Conread position: | 857-1089 |
| Cow position: | chr27:3994350-3994121 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 197, 175 |
| Conread position: | 862-1098 |
| Cow position: | chr27:344963-344727 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 195, 230 |
| Conread position: | 865-1089 |
| Cow position: | chr27:12277074-12277298 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-1068 |
| Cow position: | chr27:18473225-18473416 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 872-1089 |
| Cow position: | chr27:19932592-19932378 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 185, 38 |
| Conread position: | 874-1083 |
| Cow position: | chr27:25784781-25784571 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 96, 137 |
| Conread position: | 875-1083 |
| Cow position: | chr27:3990827-3990618 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 875-1089 |
| Cow position: | chr27:19424405-19424189 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 877-1089 |
| Cow position: | chr27:30307293-30307081 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 177, 146 |
| Conread position: | 879-1107 |
| Cow position: | chr27:11480908-11481137 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 178, 213 |
| Conread position: | 883-1040 |
| Cow position: | chr27:2681302-2681458 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 896-1089 |
| Cow position: | chr27:3653705-3653512 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 900-1084 |
| Cow position: | chr27:15872327-15872136 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 17 |
| Conread position: | 914-1058 |
| Cow position: | chr27:8592411-8592554 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 914-1084 |
| Cow position: | chr27:4823837-4824011 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 914-1087 |
| Cow position: | chr27:6017918-6018089 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 919-1089 |
| Cow position: | chr27:4804804-4804976 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 920-1077 |
| Cow position: | chr27:8429020-8429179 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 920-1087 |
| Cow position: | chr27:4828516-4828686 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 927-1076 |
| Cow position: | chr27:22329521-22329671 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 927-1108 |
| Cow position: | chr27:6524254-6524071 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 928-1089 |
| Cow position: | chr27:12006174-12006336 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 935-1077 |
| Cow position: | chr27:3866200-3866343 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 946-1075 |
| Cow position: | chr27:13183219-13183089 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 947-1089 |
| Cow position: | chr27:20001461-20001604 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 965-1089 |
| Cow position: | chr27:15348725-15348850 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 973-1108 |
| Cow position: | chr27:14669268-14669404 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 126 |
Show alignments to all cow chromosomes.