Cow genome map

Conread name: Ss1.1-rspl28_h4.5

Conread position: 503-1089
Cow position:
Alignm length: 588
Alignm identity: 129
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 551, 0

Conread position: 773-1089
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 62

Conread position: 781-977
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 32

Conread position: 782-1056
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 204, 199

Conread position: 782-1077
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 88

Conread position: 782-1083
Cow position:
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 782-1089
Cow position:
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 295

Conread position: 782-1089
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 46

Conread position: 782-1089
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 275, 38

Conread position: 782-1089
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 147

Conread position: 783-908
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 783-908
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 783-908
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 783-938
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 783-963
Cow position:
Alignm length: 182
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 18

Conread position: 783-979
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1016
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1035
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 176, 84

Conread position: 783-1044
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 783-1048
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 783-1048
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1050
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1076
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 254, 58

Conread position: 783-1077
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 158, 57

Conread position: 783-1077
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 783-1083
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1084
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 783-1084
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 102

Conread position: 783-1084
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 783-1084
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 96

Conread position: 783-1084
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 138, 81

Conread position: 783-1084
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 86

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 51

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 270, 155

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 141

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 49

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 138, 59

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 146

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1089
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 219

Conread position: 783-1089
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 148

Conread position: 783-1089
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 271, 96

Conread position: 783-1090
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 127

Conread position: 783-1094
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 130

Conread position: 783-1106
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 783-1108
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 253

Conread position: 783-1121
Cow position:
Alignm length: 340
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 783-1131
Cow position:
Alignm length: 352
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 250, 150

Conread position: 784-1089
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 273, 73

Conread position: 784-1089
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 784-1118
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 265, 126

Conread position: 785-919
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 785-1016
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 785-1076
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 785-1077
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 271, 110

Conread position: 785-1089
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 269, 47

Conread position: 785-1090
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 785-1137
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 31

Conread position: 786-1089
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 269, 14

Conread position: 786-1108
Cow position:
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 98

Conread position: 787-1063
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 788-1075
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 266, 249

Conread position: 788-1081
Cow position:
Alignm length: 296
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 81

Conread position: 791-916
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 794-1089
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 796-1089
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 97

Conread position: 797-1082
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 85

Conread position: 800-1089
Cow position:
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 7

Conread position: 801-1089
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 0

Conread position: 802-952
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 802-1084
Cow position:
Alignm length: 284
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 204

Conread position: 802-1089
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 802-1089
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 802-1089
Cow position:
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 802-1089
Cow position:
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 802-1089
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 38

Conread position: 804-1048
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 144

Conread position: 807-1084
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 55

Conread position: 811-1089
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 27

Conread position: 814-1089
Cow position:
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 120

Conread position: 816-1089
Cow position:
Alignm length: 287
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 224

Conread position: 816-1113
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 175

Conread position: 817-1016
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 149, 39

Conread position: 817-1069
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 198, 111

Conread position: 817-1084
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 24

Conread position: 818-1056
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 201

Conread position: 819-1054
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 824-1089
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 827-1089
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 137

Conread position: 834-1087
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 135, 92

Conread position: 838-1089
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 844-1089
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 133

Conread position: 844-1089
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 77

Conread position: 845-1108
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 854-1066
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 855-1076
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 199, 20

Conread position: 857-1089
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 197, 175

Conread position: 862-1098
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 195, 230

Conread position: 865-1089
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 871-1068
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 39

Conread position: 872-1089
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 185, 38

Conread position: 874-1083
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 96, 137

Conread position: 875-1083
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 182, 0

Conread position: 875-1089
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 877-1089
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 177, 146

Conread position: 879-1107
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 178, 213

Conread position: 883-1040
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 149, 0

Conread position: 896-1089
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 158, 53

Conread position: 900-1084
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 17

Conread position: 914-1058
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 914-1084
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 914-1087
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 46

Conread position: 919-1089
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 920-1077
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 920-1087
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 927-1076
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 62

Conread position: 927-1108
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 79

Conread position: 928-1089
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 0

Conread position: 935-1077
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 946-1075
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 947-1089
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 965-1089
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 973-1108
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 126

Show alignments to all cow chromosomes.