Cow genome map

Conread name: Ss1.1-unkn-05A10at3.5

Conread position: 1-127
Cow position:
Alignm length: 127
Alignm identity: 119
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 120
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 117
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 113
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 120
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 112
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 127-257
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 127-257
Cow position:
Alignm length: 131
Alignm identity: 113
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 127-258
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 127-272
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 251-375
Cow position:
Alignm length: 125
Alignm identity: 112
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 253-375
Cow position:
Alignm length: 123
Alignm identity: 119
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 254-373
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-375
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-572
Cow position:
Alignm length: 203
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 373-572
Cow position:
Alignm length: 200
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 373-572
Cow position:
Alignm length: 200
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 373-572
Cow position:
Alignm length: 200
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 373-580
Cow position:
Alignm length: 208
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 569-755
Cow position:
Alignm length: 187
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 569-755
Cow position:
Alignm length: 187
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 572-755
Cow position:
Alignm length: 184
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 572-755
Cow position:
Alignm length: 184
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 572-755
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 139

Conread position: 754-921
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 754-926
Cow position:
Alignm length: 173
Alignm identity: 148
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 754-926
Cow position:
Alignm length: 173
Alignm identity: 143
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 754-926
Cow position:
Alignm length: 173
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 754-926
Cow position:
Alignm length: 173
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 922-1047
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 922-1047
Cow position:
Alignm length: 126
Alignm identity: 119
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 922-1050
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1042-1316
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1356
Cow position:
Alignm length: 312
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1356
Cow position:
Alignm length: 312
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1356
Cow position:
Alignm length: 312
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1356
Cow position:
Alignm length: 312
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1354-1559
Cow position:
Alignm length: 206
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1354-1559
Cow position:
Alignm length: 206
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1354-1559
Cow position:
Alignm length: 206
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1354-1559
Cow position:
Alignm length: 206
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1354-1559
Cow position:
Alignm length: 206
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1553-1686
Cow position:
Alignm length: 134
Alignm identity: 128
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1556-1686
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1556-1686
Cow position:
Alignm length: 131
Alignm identity: 127
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1557-1686
Cow position:
Alignm length: 130
Alignm identity: 125
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1558-1684
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1686-1858
Cow position:
Alignm length: 173
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1686-1859
Cow position:
Alignm length: 174
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1686-1859
Cow position:
Alignm length: 174
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1686-1859
Cow position:
Alignm length: 174
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1686-1862
Cow position:
Alignm length: 177
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1856-1961
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1856-1961
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1856-1961
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1959-2058
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1964-2056
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2057-2186
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 45

Conread position: 2057-2270
Cow position:
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 140

Conread position: 2057-2282
Cow position:
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 201

Conread position: 2057-2287
Cow position:
Alignm length: 232
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 2057-2410
Cow position:
Alignm length: 359
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Show alignments to all cow chromosomes.