Cow genome map
| Conread name: | Thy1-THY010012A03 |
| Conread position: | 7-433 |
| Cow position: | chr11:17937271-17937713 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 15-476 |
| Cow position: | chr11:3393454-3393943 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 15-478 |
| Cow position: | chr11:13061467-13061947 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 16-478 |
| Cow position: | chr11:11991701-11991214 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 317 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 20, 187 |
| Conread position: | 20-477 |
| Cow position: | chr11:46780371-46780854 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 182 |
| Conread position: | 34-485 |
| Cow position: | chr11:33600953-33601430 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 309 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 25, 177 |
| Conread position: | 51-460 |
| Cow position: | chr11:37278481-37278908 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 64-477 |
| Cow position: | chr11:65409459-65409874 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 239 |
| Conread position: | 153-480 |
| Cow position: | chr11:52297626-52297948 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 168, 15 |
| Conread position: | 161-384 |
| Cow position: | chr11:31429342-31429565 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-479 |
| Cow position: | chr11:76603439-76603115 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 195-477 |
| Cow position: | chr11:67295506-67295791 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 204-401 |
| Cow position: | chr11:10807646-10807845 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 204-483 |
| Cow position: | chr11:16757605-16757887 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 106, 98 |
| Conread position: | 204-485 |
| Cow position: | chr11:34841657-34841939 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 206-405 |
| Cow position: | chr11:75370157-75369956 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 206-478 |
| Cow position: | chr11:43844876-43845152 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 167, 117 |
| Conread position: | 206-478 |
| Cow position: | chr11:68276462-68276185 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 208-464 |
| Cow position: | chr11:75195656-75195916 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 112, 133 |
| Conread position: | 231-474 |
| Cow position: | chr11:12316597-12316843 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 106 |
Show alignments to all cow chromosomes.