Cow genome map
| Conread name: | Thy1-THY010012A03 |
| Conread position: | 3-478 |
| Cow position: | chr16:5350190-5350692 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 16-476 |
| Cow position: | chr16:41806-41353 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 16-478 |
| Cow position: | chr16:5436130-5435641 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 16-478 |
| Cow position: | chr16:12534663-12535152 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 16-478 |
| Cow position: | chr16:24240096-24240584 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 16-478 |
| Cow position: | chr16:28467817-28468307 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 16-485 |
| Cow position: | chr16:3147736-3148229 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 198 |
| Conread position: | 16-485 |
| Cow position: | chr16:28205813-28206301 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 316 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 18-485 |
| Cow position: | chr16:43893960-43894451 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 316 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 30-473 |
| Cow position: | chr16:2962568-2963036 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 30-485 |
| Cow position: | chr16:5489160-5488681 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 310 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 181 |
| Conread position: | 34-485 |
| Cow position: | chr16:2479875-2480345 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 167 |
| Conread position: | 35-479 |
| Cow position: | chr16:2723941-2724409 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 61-475 |
| Cow position: | chr16:23472467-23472041 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 65-479 |
| Cow position: | chr16:3596782-3597219 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 296 |
| Conread position: | 170-476 |
| Cow position: | chr16:45654439-45654757 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 170-479 |
| Cow position: | chr16:50036484-50036168 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 175-455 |
| Cow position: | chr16:25454352-25454640 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 175-477 |
| Cow position: | chr16:31619064-31619371 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 31, 296 |
| Conread position: | 181-464 |
| Cow position: | chr16:34310806-34310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 204-454 |
| Cow position: | chr16:13792089-13791839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 204-464 |
| Cow position: | chr16:22124607-22124870 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 204-464 |
| Cow position: | chr16:31122693-31122954 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 164, 119 |
| Conread position: | 204-477 |
| Cow position: | chr16:3338471-3338195 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 204-477 |
| Cow position: | chr16:28193208-28193484 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 116, 133 |
| Conread position: | 204-480 |
| Cow position: | chr16:25174327-25174048 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 137 |
| Conread position: | 205-453 |
| Cow position: | chr16:8000542-8000290 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 136 |
| Conread position: | 206-479 |
| Cow position: | chr16:24147731-24147465 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 208-477 |
| Cow position: | chr16:23248873-23249138 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 101, 94 |
| Conread position: | 226-485 |
| Cow position: | chr16:3768937-3769198 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 91, 111 |
Show alignments to all cow chromosomes.