Cow genome map
| Conread name: | Thy1-THY010012A03 |
| Conread position: | 1-479 |
| Cow position: | chr5:70289099-70289579 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 9-376 |
| Cow position: | chr5:53945905-53945535 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 192 |
| Conread position: | 16-478 |
| Cow position: | chr5:14635755-14636244 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 187 |
| Conread position: | 18-477 |
| Cow position: | chr5:21190040-21189554 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 316 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 186 |
| Conread position: | 18-478 |
| Cow position: | chr5:29969431-29968943 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 321 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 18-485 |
| Cow position: | chr5:7498162-7498656 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 326 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 34-477 |
| Cow position: | chr5:70593201-70593666 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 167 |
| Conread position: | 61-448 |
| Cow position: | chr5:31097055-31097458 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 144 |
| Conread position: | 61-478 |
| Cow position: | chr5:46677358-46676948 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 152-442 |
| Cow position: | chr5:20779814-20780110 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 153-479 |
| Cow position: | chr5:35180899-35180566 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 153-480 |
| Cow position: | chr5:31145137-31145465 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 184-478 |
| Cow position: | chr5:73485251-73485551 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 186-477 |
| Cow position: | chr5:35478313-35478026 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 241, 18 |
| Conread position: | 196-437 |
| Cow position: | chr5:57148189-57147944 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 225 |
| Conread position: | 199-399 |
| Cow position: | chr5:42232118-42232322 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 203-475 |
| Cow position: | chr5:21828444-21828169 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 138 |
| Conread position: | 204-476 |
| Cow position: | chr5:52289368-52289093 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 113, 140 |
| Conread position: | 204-479 |
| Cow position: | chr5:23641409-23641687 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 204-479 |
| Cow position: | chr5:69771763-69771485 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 172, 265 |
| Conread position: | 206-454 |
| Cow position: | chr5:37715009-37715264 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 206-464 |
| Cow position: | chr5:49817129-49816877 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 159 |
| Conread position: | 206-480 |
| Cow position: | chr5:35967786-35967516 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 208-477 |
| Cow position: | chr5:3789831-3789559 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 133 |
| Conread position: | 208-478 |
| Cow position: | chr5:7175906-7175633 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 136 |
| Conread position: | 208-478 |
| Cow position: | chr5:10922453-10922180 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 208-478 |
| Cow position: | chr5:55631672-55631399 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 129 |
| Conread position: | 658-810 |
| Cow position: | chr5:70289598-70289755 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.