Cow genome map
| Conread name: | Thy1-THY010012A03 |
| Conread position: | 3-477 |
| Cow position: | chr6:8753484-8753980 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 10-399 |
| Cow position: | chr6:18771486-18771871 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 16-478 |
| Cow position: | chr6:51718519-51718030 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 198 |
| Conread position: | 16-485 |
| Cow position: | chr6:706958-706466 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 198 |
| Conread position: | 18-478 |
| Cow position: | chr6:3271517-3272009 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 18-478 |
| Cow position: | chr6:6181764-6182252 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 18-479 |
| Cow position: | chr6:9737300-9737791 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 188 |
| Conread position: | 30-485 |
| Cow position: | chr6:479492-479014 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 34-478 |
| Cow position: | chr6:17050313-17049851 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 34-485 |
| Cow position: | chr6:11288524-11288999 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 34-485 |
| Cow position: | chr6:47039280-47039743 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 131 |
| Conread position: | 51-479 |
| Cow position: | chr6:6460035-6459582 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 148-479 |
| Cow position: | chr6:2607274-2606933 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 170-479 |
| Cow position: | chr6:48473462-48473156 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 195-477 |
| Cow position: | chr6:65942599-65942883 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 175, 275 |
| Conread position: | 197-477 |
| Cow position: | chr6:47527027-47526746 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 143 |
| Conread position: | 204-479 |
| Cow position: | chr6:19060024-19059745 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 137 |
| Conread position: | 204-480 |
| Cow position: | chr6:63094408-63094129 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 116, 137 |
| Conread position: | 206-417 |
| Cow position: | chr6:3515739-3515528 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-420 |
| Cow position: | chr6:29503635-29503417 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 206-464 |
| Cow position: | chr6:34476007-34476269 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 135 |
| Conread position: | 208-478 |
| Cow position: | chr6:38872781-38873054 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 112, 133 |
| Conread position: | 208-485 |
| Cow position: | chr6:15275494-15275772 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 211-457 |
| Cow position: | chr6:40358134-40358384 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 130 |
| Conread position: | 226-465 |
| Cow position: | chr6:65844784-65844541 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 226-478 |
| Cow position: | chr6:41193076-41192821 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 226-482 |
| Cow position: | chr6:40814090-40813831 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 115 |
Show alignments to all cow chromosomes.