Cow genome map

Conread name: Thy1-THY010013H05

Conread position: 1-242
Cow position:
Alignm length: 244
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 196

Conread position: 1-260
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 236

Conread position: 1-339
Cow position:
Alignm length: 340
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-345
Cow position:
Alignm length: 348
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 192

Conread position: 1-357
Cow position:
Alignm length: 359
Alignm identity: 230
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 137

Conread position: 1-386
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-388
Cow position:
Alignm length: 397
Alignm identity: 266
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 137

Conread position: 1-408
Cow position:
Alignm length: 411
Alignm identity: 253
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 1-421
Cow position:
Alignm length: 424
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 1-421
Cow position:
Alignm length: 425
Alignm identity: 271
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 29

Conread position: 1-421
Cow position:
Alignm length: 424
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 3-307
Cow position:
Alignm length: 309
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 152

Conread position: 3-344
Cow position:
Alignm length: 345
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 130

Conread position: 3-345
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 193, 188

Conread position: 3-351
Cow position:
Alignm length: 351
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 225

Conread position: 3-357
Cow position:
Alignm length: 357
Alignm identity: 221
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 189

Conread position: 3-414
Cow position:
Alignm length: 418
Alignm identity: 263
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 150

Conread position: 8-421
Cow position:
Alignm length: 420
Alignm identity: 273
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 26, 8

Conread position: 9-345
Cow position:
Alignm length: 337
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 9-345
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 141

Conread position: 9-345
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 201, 215

Conread position: 9-357
Cow position:
Alignm length: 350
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 201, 215

Conread position: 9-357
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 141

Conread position: 9-362
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 9-362
Cow position:
Alignm length: 354
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 9-362
Cow position:
Alignm length: 355
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 185, 189

Conread position: 9-363
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-375
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 0

Conread position: 9-378
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 349, 0

Conread position: 9-379
Cow position:
Alignm length: 373
Alignm identity: 232
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 350, 0

Conread position: 9-379
Cow position:
Alignm length: 373
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 0

Conread position: 9-379
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 0

Conread position: 9-384
Cow position:
Alignm length: 379
Alignm identity: 245
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 224, 215

Conread position: 9-393
Cow position:
Alignm length: 388
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 185, 189

Conread position: 9-414
Cow position:
Alignm length: 411
Alignm identity: 256
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 130, 120

Conread position: 9-414
Cow position:
Alignm length: 409
Alignm identity: 265
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 126, 33

Conread position: 9-421
Cow position:
Alignm length: 415
Alignm identity: 265
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 338, 0

Conread position: 9-421
Cow position:
Alignm length: 416
Alignm identity: 266
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 183, 187

Conread position: 9-421
Cow position:
Alignm length: 415
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 340, 0

Conread position: 9-421
Cow position:
Alignm length: 416
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 54

Conread position: 9-421
Cow position:
Alignm length: 416
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 373

Conread position: 9-421
Cow position:
Alignm length: 417
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 137

Conread position: 9-421
Cow position:
Alignm length: 415
Alignm identity: 260
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 357, 0

Conread position: 9-421
Cow position:
Alignm length: 416
Alignm identity: 268
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 357, 373

Conread position: 9-421
Cow position:
Alignm length: 415
Alignm identity: 258
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 350, 0

Conread position: 9-421
Cow position:
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 0

Conread position: 9-421
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 215

Conread position: 9-422
Cow position:
Alignm length: 417
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 225, 218

Conread position: 9-425
Cow position:
Alignm length: 419
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 357, 0

Conread position: 9-425
Cow position:
Alignm length: 420
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 136, 141

Conread position: 11-334
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 97

Conread position: 11-334
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 18

Conread position: 11-334
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 19

Conread position: 11-339
Cow position:
Alignm length: 331
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 125

Conread position: 11-339
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 217, 225

Conread position: 11-341
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 143

Conread position: 11-349
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 18

Conread position: 11-357
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 13, 18

Conread position: 11-357
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 18

Conread position: 11-357
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 185, 180

Conread position: 11-357
Cow position:
Alignm length: 347
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 11-357
Cow position:
Alignm length: 348
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 19

Conread position: 11-357
Cow position:
Alignm length: 349
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 18

Conread position: 11-357
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 185, 180

Conread position: 11-357
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 180

Conread position: 11-362
Cow position:
Alignm length: 355
Alignm identity: 235
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 131, 136

Conread position: 11-362
Cow position:
Alignm length: 355
Alignm identity: 218
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 132

Conread position: 11-379
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 0

Conread position: 11-379
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 0

Conread position: 11-382
Cow position:
Alignm length: 375
Alignm identity: 244
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 135, 143

Conread position: 11-389
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 180

Conread position: 11-389
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 0

Conread position: 11-414
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 139

Conread position: 11-421
Cow position:
Alignm length: 414
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 139

Conread position: 11-421
Cow position:
Alignm length: 415
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 136

Conread position: 11-421
Cow position:
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 0

Conread position: 11-421
Cow position:
Alignm length: 414
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 386

Conread position: 11-429
Cow position:
Alignm length: 424
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 51

Conread position: 12-388
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 128, 142

Conread position: 14-362
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 210

Conread position: 14-428
Cow position:
Alignm length: 420
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 322

Conread position: 16-414
Cow position:
Alignm length: 404
Alignm identity: 247
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 219

Conread position: 16-421
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 0

Conread position: 17-342
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 122

Conread position: 19-339
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 19-345
Cow position:
Alignm length: 328
Alignm identity: 206
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 10

Conread position: 19-357
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 217, 208

Conread position: 28-251
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 80

Conread position: 28-262
Cow position:
Alignm length: 238
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 224, 0

Conread position: 28-344
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 28-345
Cow position:
Alignm length: 319
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 205, 196

Conread position: 28-345
Cow position:
Alignm length: 318
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 28-347
Cow position:
Alignm length: 320
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 28-357
Cow position:
Alignm length: 333
Alignm identity: 208
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 37

Conread position: 28-357
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 248, 254

Conread position: 28-357
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 164, 168

Conread position: 28-357
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-378
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 338, 0

Conread position: 28-379
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 337, 0

Conread position: 28-379
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 122

Conread position: 29-334
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 33

Conread position: 29-348
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-357
Cow position:
Alignm length: 330
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 205, 195

Conread position: 29-361
Cow position:
Alignm length: 339
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 103

Conread position: 29-384
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 196

Conread position: 53-421
Cow position:
Alignm length: 372
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 255, 267

Conread position: 67-389
Cow position:
Alignm length: 327
Alignm identity: 209
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 124

Conread position: 67-421
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 299, 0

Conread position: 68-339
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 165, 155

Conread position: 80-357
Cow position:
Alignm length: 280
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 97

Conread position: 85-389
Cow position:
Alignm length: 309
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 149

Conread position: 86-357
Cow position:
Alignm length: 274
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 68

Conread position: 86-428
Cow position:
Alignm length: 347
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 105

Conread position: 113-428
Cow position:
Alignm length: 321
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 78

Conread position: 135-471
Cow position:
Alignm length: 344
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 227, 19

Conread position: 152-428
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 39

Show alignments to all cow chromosomes.