Cow genome map
| Conread name: | Thy1-THY010013H05 |
| Conread position: | 3-295 |
| Cow position: | chr17:44467523-44467816 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 3-345 |
| Cow position: | chr17:44467775-44468118 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 3-345 |
| Cow position: | chr17:44468027-44468370 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 3-360 |
| Cow position: | chr17:44467943-44468301 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 3-418 |
| Cow position: | chr17:41440620-41440202 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-340 |
| Cow position: | chr17:22552930-22552599 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 11-339 |
| Cow position: | chr17:44467364-44467692 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-345 |
| Cow position: | chr17:44467616-44467950 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 137, 141 |
| Conread position: | 11-345 |
| Cow position: | chr17:44467700-44468034 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 185, 180 |
| Conread position: | 11-352 |
| Cow position: | chr17:41440527-41440186 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-357 |
| Cow position: | chr17:41440779-41440433 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 135, 143 |
| Conread position: | 11-362 |
| Cow position: | chr17:41441115-41440764 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 185, 180 |
| Conread position: | 11-397 |
| Cow position: | chr17:41440947-41440557 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 14-345 |
| Cow position: | chr17:44467451-44467782 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-325 |
| Cow position: | chr17:41440691-41440381 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-306 |
| Cow position: | chr17:41441014-41440736 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 119 |
| Conread position: | 28-341 |
| Cow position: | chr17:22552323-22552010 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 28-345 |
| Cow position: | chr17:22552407-22552090 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 28-384 |
| Cow position: | chr17:41440846-41440488 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 29-385 |
| Cow position: | chr17:44467886-44468244 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 330, 0 |
| Conread position: | 29-388 |
| Cow position: | chr17:22452103-22451742 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 247, 253 |
| Conread position: | 68-345 |
| Cow position: | chr17:22551863-22551586 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 154, 146 |
| Conread position: | 92-342 |
| Cow position: | chr17:41441118-41440867 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 99 |
| Conread position: | 140-384 |
| Cow position: | chr17:41441154-41440908 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 30 |
Show alignments to all cow chromosomes.