Cow genome map


           Conread name:
           Thy1-THY010013H05
        

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 237
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 236
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 195
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-337
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 189
               

               Conread position:
               3-339
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               6-344
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               130, 138
               

               Conread position:
               6-345
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               7-313
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-327
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-389
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               230, 217
               

               Conread position:
               9-258
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-262
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-269
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-341
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-345
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-345
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-347
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               226, 218
               

               Conread position:
               9-349
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               9-354
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               215, 227
               

               Conread position:
               9-357
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               215, 227
               

               Conread position:
               9-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               187, 183
               

               Conread position:
               9-357
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               9-421
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               10-269
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               227, 214
               

               Conread position:
               10-345
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               10-345
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               294, 286
               

               Conread position:
               11-252
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-313
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               11-313
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               180, 185
               

               Conread position:
               11-313
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               11-334
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-341
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-345
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               227, 219
               

               Conread position:
               11-345
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 110
               

               Conread position:
               11-345
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               225, 213
               

               Conread position:
               11-345
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 51
               

               Conread position:
               11-347
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               250, 283
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               141, 129
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-425
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               12-341
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               224, 218
               

               Conread position:
               12-357
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-334
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               220, 35
               

               Conread position:
               15-345
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               17-315
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 109
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               120, 126
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               28-379
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               122, 96
               

               Conread position:
               29-300
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 118
               

               Conread position:
               29-312
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-341
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               195, 207
               

               Conread position:
               29-341
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-343
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               29-350
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               29-382
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               185, 199
               

               Conread position:
               29-421
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               40-384
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               56-357
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               68-357
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               165, 156
               

               Conread position:
               68-357
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-362
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               165, 157
               

               Conread position:
               82-357
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 149
               

               Conread position:
               84-345
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               197, 192
               

               Conread position:
               84-345
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               88-421
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 308
               

               Conread position:
               89-357
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               92-361
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               172-357
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.