Cow genome map
| Conread name: | Thy1-THY010013H05 |
| Conread position: | 1-387 |
| Cow position: | chr6:49340735-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-414 |
| Cow position: | chr6:49396288-49396704 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 3-357 |
| Cow position: | chr6:49428729-49429084 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 222 |
| Conread position: | 3-362 |
| Cow position: | chr6:49428561-49428921 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 3-391 |
| Cow position: | chr6:49428477-49428868 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 3-428 |
| Cow position: | chr6:49428981-49429409 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 148 |
| Conread position: | 6-422 |
| Cow position: | chr6:49396546-49396964 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 0 |
| Conread position: | 7-421 |
| Cow position: | chr6:49395881-49396291 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 350, 0 |
| Conread position: | 9-295 |
| Cow position: | chr6:49362343-49362629 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 9-341 |
| Cow position: | chr6:49340576-49340908 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-414 |
| Cow position: | chr6:49396135-49396536 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 9-421 |
| Cow position: | chr6:49396381-49396795 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 0 |
| Conread position: | 10-421 |
| Cow position: | chr6:49396466-49396879 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 182, 187 |
| Conread position: | 11-362 |
| Cow position: | chr6:49428906-49429257 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 186 |
| Conread position: | 11-375 |
| Cow position: | chr6:49362273-49362627 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 310, 60 |
| Conread position: | 11-379 |
| Cow position: | chr6:49428318-49428688 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 325 |
| Conread position: | 11-379 |
| Cow position: | chr6:49428402-49428772 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 11-421 |
| Cow position: | chr6:49428654-49429066 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 141 |
| Conread position: | 11-421 |
| Cow position: | chr6:49429074-49429486 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 0 |
| Conread position: | 11-528 |
| Cow position: | chr6:49429158-49429676 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 480 |
| Conread position: | 28-379 |
| Cow position: | chr6:49428251-49428604 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 28-408 |
| Cow position: | chr6:49428839-49429221 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 0 |
| Conread position: | 28-421 |
| Cow position: | chr6:49396232-49396627 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 0 |
| Conread position: | 29-388 |
| Cow position: | chr6:49340848-49341209 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 330, 0 |
| Conread position: | 92-389 |
| Cow position: | chr6:49428231-49428530 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 134-379 |
| Cow position: | chr6:49428182-49428436 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.