Cow genome map


           Conread name:
           Thy1-THY010056G11
        

               Conread position:
               73-214
               

               Cow position:
               chr3:13349100-13348964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               73-228
               

               Cow position:
               chr3:59617013-59616865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 33
               

               Conread position:
               77-235
               

               Cow position:
               chr3:58940204-58940359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               79-208
               

               Cow position:
               chr3:53192234-53192107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               79-218
               

               Cow position:
               chr3:623787-623928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               79-222
               

               Cow position:
               chr3:57760556-57760702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               82-226
               

               Cow position:
               chr3:29413121-29413265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               83-227
               

               Cow position:
               chr3:43863673-43863528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               85-226
               

               Cow position:
               chr3:2680577-2680722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               106-227
               

               Cow position:
               chr3:61169873-61170000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               110-222
               

               Cow position:
               chr3:507565-507681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               110-228
               

               Cow position:
               chr3:47726060-47725943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 53
               
Show alignments to all cow chromosomes.