Cow genome map
| Conread name: | Thy1-THY010093A08 |
| Conread position: | 1-319 |
| Cow position: | chr5:70631233-70630902 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 1-336 |
| Cow position: | chr5:35215455-35215122 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 1-337 |
| Cow position: | chr5:21184583-21184235 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 1-337 |
| Cow position: | chr5:63631628-63631981 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 230 |
| Conread position: | 1-348 |
| Cow position: | chr5:21167789-21167437 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 148 |
| Conread position: | 1-348 |
| Cow position: | chr5:22890351-22889995 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 1-348 |
| Cow position: | chr5:27899368-27899017 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 147 |
| Conread position: | 4-348 |
| Cow position: | chr5:27101028-27101384 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 155 |
| Conread position: | 5-315 |
| Cow position: | chr5:62268331-62268656 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 5-336 |
| Cow position: | chr5:61101996-61102346 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 7-348 |
| Cow position: | chr5:4105297-4105654 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 7-348 |
| Cow position: | chr5:46317658-46317312 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 9-348 |
| Cow position: | chr5:24539197-24538847 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 17-344 |
| Cow position: | chr5:25254490-25254820 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 24-304 |
| Cow position: | chr5:4084312-4084020 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 27-348 |
| Cow position: | chr5:20693446-20693124 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 32-324 |
| Cow position: | chr5:62608978-62609284 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 36-348 |
| Cow position: | chr5:41556714-41556399 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 90-350 |
| Cow position: | chr5:34452677-34452412 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 100-325 |
| Cow position: | chr5:47044053-47044282 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 157-348 |
| Cow position: | chr5:16159692-16159891 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.