Cow genome map
Conread name: | Thy1-THY010099F01 |
Conread position: | 22-321 |
Cow position: | chr11:7683816-7684108 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 222 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 24-325 |
Cow position: | chr11:5648608-5648894 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 219 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 24, 15 |
Conread position: | 25-333 |
Cow position: | chr11:84795883-84795586 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 227 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 26, 14 |
Conread position: | 38-342 |
Cow position: | chr11:11752638-11752342 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 214 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 29, 78 |
Conread position: | 39-332 |
Cow position: | chr11:9368710-9368988 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 208 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 150, 18 |
Conread position: | 43-320 |
Cow position: | chr11:47566054-47565787 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 74, 95 |
Conread position: | 43-342 |
Cow position: | chr11:54244562-54244844 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 26, 9 |
Conread position: | 59-342 |
Cow position: | chr11:69402350-69402079 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 199 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 9, 88 |
Conread position: | 65-325 |
Cow position: | chr11:56821343-56821087 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 184 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 48, 94 |
Conread position: | 66-303 |
Cow position: | chr11:20491480-20491700 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 57, 33 |
Conread position: | 66-318 |
Cow position: | chr11:50951463-50951703 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 183 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 56, 94 |
Conread position: | 66-325 |
Cow position: | chr11:21136721-21136969 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 185 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 218, 49 |
Conread position: | 66-325 |
Cow position: | chr11:37372217-37372466 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 182 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 50, 69 |
Conread position: | 66-325 |
Cow position: | chr11:45889873-45890114 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 184 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 207, 45 |
Conread position: | 66-331 |
Cow position: | chr11:7143335-7143615 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 197 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 52, 161 |
Conread position: | 66-332 |
Cow position: | chr11:14308545-14308797 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 187 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 54, 78 |
Conread position: | 66-332 |
Cow position: | chr11:67871696-67871441 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 48, 23 |
Conread position: | 66-333 |
Cow position: | chr11:8828721-8828467 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 218, 91 |
Conread position: | 66-333 |
Cow position: | chr11:27681407-27681664 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 89 |
Conread position: | 66-333 |
Cow position: | chr11:50937839-50937575 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 192 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 178, 19 |
Conread position: | 66-339 |
Cow position: | chr11:38845354-38845098 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 196 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 212, 61 |
Conread position: | 66-339 |
Cow position: | chr11:52832808-52832557 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 212, 52 |
Conread position: | 66-339 |
Cow position: | chr11:77683076-77683341 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 56, 82 |
Conread position: | 66-342 |
Cow position: | chr11:41272044-41272308 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 218, 49 |
Conread position: | 66-347 |
Cow position: | chr11:32439043-32438774 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 48, 23 |
Conread position: | 66-347 |
Cow position: | chr11:64904906-64905173 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 225, 56 |
Conread position: | 67-333 |
Cow position: | chr11:34946163-34945908 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 191 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 210, 78 |
Conread position: | 69-336 |
Cow position: | chr11:9055870-9056126 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 191 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 44, 85 |
Conread position: | 76-323 |
Cow position: | chr11:50953648-50953410 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 203, 37 |
Conread position: | 80-325 |
Cow position: | chr11:19259592-19259357 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 201, 73 |
Conread position: | 80-325 |
Cow position: | chr11:43646492-43646255 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 198, 46 |
Conread position: | 83-339 |
Cow position: | chr11:16233017-16232762 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 185 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 121, 41 |
Conread position: | 92-332 |
Cow position: | chr11:11785265-11785495 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 179 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 30, 23 |
Conread position: | 136-344 |
Cow position: | chr11:48900880-48900663 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 144-325 |
Cow position: | chr11:373169-372989 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 151-342 |
Cow position: | chr11:56796547-56796357 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 133, 26 |
Conread position: | 154-338 |
Cow position: | chr11:76851852-76851669 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 135 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 35, 49 |
Conread position: | 159-332 |
Cow position: | chr11:7333122-7332950 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 169-322 |
Cow position: | chr11:31422729-31422883 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 112, 51 |
Conread position: | 169-332 |
Cow position: | chr11:5188127-5188288 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 100, 49 |
Conread position: | 169-339 |
Cow position: | chr11:40275603-40275429 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 109, 49 |
Conread position: | 169-339 |
Cow position: | chr11:40279095-40278921 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 109, 49 |
Conread position: | 170-322 |
Cow position: | chr11:63156919-63156772 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 170-325 |
Cow position: | chr11:63508413-63508566 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 125 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 119, 45 |
Conread position: | 170-332 |
Cow position: | chr11:52402463-52402625 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 103, 48 |
Conread position: | 173-323 |
Cow position: | chr11:14046074-14045926 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 109, 20 |
Conread position: | 173-332 |
Cow position: | chr11:6729669-6729830 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 11, 54 |
Conread position: | 174-311 |
Cow position: | chr11:14941605-14941469 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 110, 15 |
Conread position: | 174-322 |
Cow position: | chr11:19606317-19606464 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 122 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 107, 62 |
Conread position: | 174-324 |
Cow position: | chr11:47193518-47193668 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 105, 21 |
Conread position: | 174-332 |
Cow position: | chr11:27722395-27722555 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 174-334 |
Cow position: | chr11:44609568-44609726 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 108, 37 |
Conread position: | 174-339 |
Cow position: | chr11:61427597-61427757 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 110, 49 |
Conread position: | 174-339 |
Cow position: | chr11:65958697-65958532 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 104, 41 |
Conread position: | 174-342 |
Cow position: | chr11:62574006-62573836 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 65, 91 |
Conread position: | 175-325 |
Cow position: | chr11:40269590-40269443 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 109, 20 |
Conread position: | 175-327 |
Cow position: | chr11:39864192-39864350 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 175-342 |
Cow position: | chr11:34136506-34136673 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 116, 42 |
Conread position: | 175-347 |
Cow position: | chr11:696344-696171 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 109, 43 |
Conread position: | 176-325 |
Cow position: | chr11:19501974-19502123 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 105, 41 |
Conread position: | 181-325 |
Cow position: | chr11:32072155-32072298 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 100, 51 |
Conread position: | 181-325 |
Cow position: | chr11:49218338-49218192 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 182-332 |
Cow position: | chr11:65988235-65988383 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 99, 30 |
Conread position: | 182-333 |
Cow position: | chr11:24216149-24216300 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 109 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 182-379 |
Cow position: | chr11:34642222-34642023 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 141 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 99, 36 |
Conread position: | 185-350 |
Cow position: | chr11:54058005-54058177 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 99, 33 |
Conread position: | 186-332 |
Cow position: | chr11:22009372-22009225 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 95, 140 |
Conread position: | 201-355 |
Cow position: | chr11:33191591-33191437 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 9 |
Show alignments to all cow chromosomes.