Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 2-342 |
| Cow position: | chr14:7647834-7648167 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 6-324 |
| Cow position: | chr14:12559290-12559606 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 38-342 |
| Cow position: | chr14:7582311-7582590 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 46-341 |
| Cow position: | chr14:28605370-28605087 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 63-325 |
| Cow position: | chr14:21691154-21691406 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 58, 83 |
| Conread position: | 66-317 |
| Cow position: | chr14:20045668-20045429 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 225, 86 |
| Conread position: | 66-320 |
| Cow position: | chr14:22381436-22381697 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 66-323 |
| Cow position: | chr14:44861120-44861360 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 66-325 |
| Cow position: | chr14:11615102-11615352 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 218, 51 |
| Conread position: | 66-326 |
| Cow position: | chr14:30179397-30179661 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 66-334 |
| Cow position: | chr14:35700542-35700288 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 66-338 |
| Cow position: | chr14:37678886-37679148 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 217, 91 |
| Conread position: | 66-339 |
| Cow position: | chr14:47604181-47604444 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 66-342 |
| Cow position: | chr14:23107443-23107172 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 66-352 |
| Cow position: | chr14:26108751-26108474 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 67-320 |
| Cow position: | chr14:39058693-39058453 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 67-325 |
| Cow position: | chr14:26493990-26493742 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 67-332 |
| Cow position: | chr14:31785082-31784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 92 |
| Conread position: | 76-333 |
| Cow position: | chr14:18979094-18979331 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 89-332 |
| Cow position: | chr14:20795878-20795640 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 152-342 |
| Cow position: | chr14:47600366-47600553 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 169-280 |
| Cow position: | chr14:28327097-28327206 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 169-325 |
| Cow position: | chr14:26805024-26805182 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 169-338 |
| Cow position: | chr14:19022872-19023039 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 169-342 |
| Cow position: | chr14:36080889-36081064 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 112, 5 |
| Conread position: | 174-322 |
| Cow position: | chr14:6441930-6441780 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 174-325 |
| Cow position: | chr14:47519731-47519882 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 174-332 |
| Cow position: | chr14:38355210-38355052 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 77 |
| Conread position: | 174-346 |
| Cow position: | chr14:41531643-41531812 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 175-325 |
| Cow position: | chr14:10692248-10692391 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 176-323 |
| Cow position: | chr14:26153251-26153397 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 176-325 |
| Cow position: | chr14:44032055-44031904 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 182-319 |
| Cow position: | chr14:20284168-20284029 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 182-325 |
| Cow position: | chr14:45849202-45849347 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 182-332 |
| Cow position: | chr14:20701802-20701956 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 182-337 |
| Cow position: | chr14:37333712-37333559 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 198-324 |
| Cow position: | chr14:38688238-38688362 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 16 |
Show alignments to all cow chromosomes.