Cow genome map


           Conread name:
           Thy1-THY010099F01
        

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               6-280
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               50-342
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               66-296
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               191, 49
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               216, 48
               

               Conread position:
               66-336
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               77-300
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               89-286
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               134-325
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               155-342
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               123, 63
               

               Conread position:
               159-296
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               161-322
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               168-342
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               169-323
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 49
               

               Conread position:
               170-323
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 50
               

               Conread position:
               170-325
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               174-302
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               174-333
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               174-342
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               110, 75
               

               Conread position:
               174-343
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-343
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 132
               

               Conread position:
               174-346
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               174-355
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               175-325
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               175-325
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               175-332
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               175-332
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               176-333
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               179-317
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               182-325
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               191-325
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 29
               
Show alignments to all cow chromosomes.