Cow genome map

Conread name: Thy1-THY010099F01

Conread position: 1-342
Cow position: chr18:51271938-51271589 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 18

Conread position: 6-344
Cow position: chr18:33843243-33842927 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 76

Conread position: 23-296
Cow position: chr18:21682141-21681868 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 23-347
Cow position: chr18:15831748-15831442 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 16

Conread position: 44-326
Cow position: chr18:45961404-45961132 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 15

Conread position: 63-325
Cow position: chr18:51298370-51298619 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 91

Conread position: 66-284
Cow position: chr18:35359864-35360064 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 66-293
Cow position: chr18:23424813-23425026 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 218, 57

Conread position: 66-301
Cow position: chr18:39211140-39210898 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 39

Conread position: 66-312
Cow position: chr18:32773770-32774004 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 216, 79

Conread position: 66-324
Cow position: chr18:16842169-16841913 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 84

Conread position: 66-325
Cow position: chr18:29796531-29796290 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 218, 49

Conread position: 66-343
Cow position: chr18:23714993-23714710 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 89

Conread position: 67-301
Cow position: chr18:16726543-16726764 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 211, 78

Conread position: 67-325
Cow position: chr18:248919-248675 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 215, 33

Conread position: 67-328
Cow position: chr18:32908943-32909190 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 214, 38

Conread position: 73-337
Cow position: chr18:15689185-15689433 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 211, 71

Conread position: 80-331
Cow position: chr18:24855938-24855698 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 202, 73

Conread position: 82-323
Cow position: chr18:38126541-38126312 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 78

Conread position: 83-311
Cow position: chr18:46873953-46873741 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 65

Conread position: 83-334
Cow position: chr18:2438855-2438616 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 244, 32

Conread position: 84-319
Cow position: chr18:42060985-42061209 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 76

Conread position: 124-341
Cow position: chr18:21706248-21706030 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 32

Conread position: 126-302
Cow position: chr18:48717996-48717824 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 155, 51

Conread position: 144-342
Cow position: chr18:29949705-29949899 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 76

Conread position: 171-332
Cow position: chr18:44493501-44493339 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 42

Conread position: 172-332
Cow position: chr18:4378753-4378912 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 118, 46

Conread position: 173-325
Cow position: chr18:28297878-28297725 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 78

Conread position: 174-323
Cow position: chr18:50700675-50700822 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 46

Conread position: 174-325
Cow position: chr18:21574973-21575116 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 175-324
Cow position: chr18:26372909-26373059 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 45

Conread position: 182-333
Cow position: chr18:24364064-24363913 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 36

Conread position: 192-342
Cow position: chr18:14520041-14520194 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.