Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 1-302 |
| Cow position: | chr19:5648829-5648528 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 1-323 |
| Cow position: | chr19:24721526-24721835 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 6-325 |
| Cow position: | chr19:1153055-1153368 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 40-321 |
| Cow position: | chr19:28842480-28842202 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 42-332 |
| Cow position: | chr19:31126687-31126966 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 43-325 |
| Cow position: | chr19:1713249-1712979 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 59-325 |
| Cow position: | chr19:30935874-30935608 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 65-331 |
| Cow position: | chr19:11876790-11876535 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 66-321 |
| Cow position: | chr19:36461616-36461371 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 66-325 |
| Cow position: | chr19:31614028-31614270 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 66-332 |
| Cow position: | chr19:35344840-35345097 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 135, 93 |
| Conread position: | 66-339 |
| Cow position: | chr19:2342397-2342654 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 215, 84 |
| Conread position: | 66-342 |
| Cow position: | chr19:9387551-9387813 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 213, 68 |
| Conread position: | 66-384 |
| Cow position: | chr19:15936752-15937060 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 215, 49 |
| Conread position: | 68-344 |
| Cow position: | chr19:11759331-11759051 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 263 |
| Conread position: | 74-342 |
| Cow position: | chr19:5754881-5754613 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 181 |
| Conread position: | 80-322 |
| Cow position: | chr19:7029846-7030076 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 89-333 |
| Cow position: | chr19:38871004-38871238 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 186, 60 |
| Conread position: | 167-311 |
| Cow position: | chr19:42102594-42102450 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 170-325 |
| Cow position: | chr19:20292086-20291931 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 170-338 |
| Cow position: | chr19:40026924-40026759 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 172-334 |
| Cow position: | chr19:56008716-56008556 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 173-346 |
| Cow position: | chr19:22932540-22932365 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 174-302 |
| Cow position: | chr19:46306328-46306202 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 174-302 |
| Cow position: | chr19:46497947-46498072 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 174-314 |
| Cow position: | chr19:5986244-5986386 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 174-325 |
| Cow position: | chr19:12040627-12040780 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 174-328 |
| Cow position: | chr19:4824973-4824817 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 174-346 |
| Cow position: | chr19:26003606-26003429 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 176-325 |
| Cow position: | chr19:47783754-47783601 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 179-339 |
| Cow position: | chr19:54817520-54817356 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 179-407 |
| Cow position: | chr19:50786522-50786300 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 182-311 |
| Cow position: | chr19:39986330-39986194 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 182-341 |
| Cow position: | chr19:2280626-2280469 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 191-346 |
| Cow position: | chr19:36380251-36380405 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 193-339 |
| Cow position: | chr19:39223081-39222935 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 202-349 |
| Cow position: | chr19:30653055-30652906 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.