Cow genome map


           Conread name:
           Thy1-THY010099F01
        

               Conread position:
               6-323
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               6-331
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               23-325
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               23-332
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               24-309
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               257, 15
               

               Conread position:
               32-319
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               203, 20
               

               Conread position:
               38-318
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               38-321
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               38-325
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               44-325
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               111, 64
               

               Conread position:
               45-325
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               66-275
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               66-277
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               66-295
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               66-302
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               213, 82
               

               Conread position:
               66-306
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-318
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               66-321
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-323
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               204, 56
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               225, 81
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               215, 48
               

               Conread position:
               66-327
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               66-330
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               218, 48
               

               Conread position:
               66-332
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-332
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               66-334
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               218, 61
               

               Conread position:
               66-339
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               213, 51
               

               Conread position:
               66-339
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               66-339
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               215, 83
               

               Conread position:
               66-341
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               69, 173
               

               Conread position:
               66-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-345
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               205, 23
               

               Conread position:
               66-383
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               67-302
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               67-332
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               68-302
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               213, 66
               

               Conread position:
               69-323
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               70-325
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               77-323
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               162, 53
               

               Conread position:
               82-342
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               108-323
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               145-325
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               149-314
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               132, 30
               

               Conread position:
               151-311
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               157-338
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               169-325
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               169-342
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               170-320
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               170-338
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               170-342
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 156
               

               Conread position:
               171-323
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               173-326
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               174-311
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-321
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               174-327
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-332
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 153
               

               Conread position:
               174-342
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 155
               

               Conread position:
               175-329
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               116, 151
               

               Conread position:
               176-336
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               154, 41
               

               Conread position:
               193-325
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 112
               
Show alignments to all cow chromosomes.