Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 2-240 |
| Cow position: | chr21:35897728-35897476 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 18-342 |
| Cow position: | chr21:31576431-31576740 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 23-322 |
| Cow position: | chr21:4276662-4276370 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 25-345 |
| Cow position: | chr21:18378771-18379099 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 43-339 |
| Cow position: | chr21:13358286-13358579 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 44-276 |
| Cow position: | chr21:24698446-24698666 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 44-325 |
| Cow position: | chr21:37121268-37120976 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 24, 185 |
| Conread position: | 46-346 |
| Cow position: | chr21:12301550-12301254 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 65-301 |
| Cow position: | chr21:47823287-47823058 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 66-301 |
| Cow position: | chr21:23801138-23800916 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 225, 72 |
| Conread position: | 66-302 |
| Cow position: | chr21:25800386-25800613 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 218, 63 |
| Conread position: | 66-311 |
| Cow position: | chr21:9353434-9353670 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 66-325 |
| Cow position: | chr21:13737044-13737283 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 215, 14 |
| Conread position: | 66-325 |
| Cow position: | chr21:18941842-18941598 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 215, 14 |
| Conread position: | 66-326 |
| Cow position: | chr21:15742101-15741847 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 66-332 |
| Cow position: | chr21:23786020-23786273 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 66-332 |
| Cow position: | chr21:31662455-31662709 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 218, 12 |
| Conread position: | 66-333 |
| Cow position: | chr21:9940200-9939945 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 69-342 |
| Cow position: | chr21:47715549-47715294 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 212, 46 |
| Conread position: | 71-340 |
| Cow position: | chr21:4098865-4099118 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 210, 36 |
| Conread position: | 72-349 |
| Cow position: | chr21:25286510-25286777 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 209, 34 |
| Conread position: | 75-325 |
| Cow position: | chr21:6697033-6696781 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 76-325 |
| Cow position: | chr21:11676052-11675817 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 205, 38 |
| Conread position: | 160-325 |
| Cow position: | chr21:22398229-22398384 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 163-332 |
| Cow position: | chr21:44220436-44220608 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 169-325 |
| Cow position: | chr21:49661755-49661604 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 5 |
| Conread position: | 173-342 |
| Cow position: | chr21:45355916-45356090 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 174-302 |
| Cow position: | chr21:2413137-2413267 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 174-325 |
| Cow position: | chr21:17428580-17428732 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 58 |
| Conread position: | 174-325 |
| Cow position: | chr21:22353153-22353001 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 174-325 |
| Cow position: | chr21:26147162-26147314 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 174-332 |
| Cow position: | chr21:26753575-26753732 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 131 |
| Conread position: | 174-347 |
| Cow position: | chr21:46242156-46241985 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 182-333 |
| Cow position: | chr21:17807045-17806895 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 182-346 |
| Cow position: | chr21:33947161-33946998 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 188-342 |
| Cow position: | chr21:6012815-6012662 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 39 |
Show alignments to all cow chromosomes.