Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 26-322 |
| Cow position: | chr22:26941680-26941954 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 38-377 |
| Cow position: | chr22:9466508-9466824 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 50-301 |
| Cow position: | chr22:26760618-26760858 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 61-330 |
| Cow position: | chr22:22210326-22210069 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 62-322 |
| Cow position: | chr22:15358164-15358412 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 63-329 |
| Cow position: | chr22:34675441-34675692 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 63-331 |
| Cow position: | chr22:41389027-41389282 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 66-245 |
| Cow position: | chr22:42605553-42605725 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 66-302 |
| Cow position: | chr22:22997401-22997623 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 212, 56 |
| Conread position: | 66-310 |
| Cow position: | chr22:4651104-4651334 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 154, 41 |
| Conread position: | 66-322 |
| Cow position: | chr22:33386584-33386344 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 66-323 |
| Cow position: | chr22:5622794-5622556 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 66-324 |
| Cow position: | chr22:2913202-2913445 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 215, 31 |
| Conread position: | 66-324 |
| Cow position: | chr22:19653062-19652803 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 66-325 |
| Cow position: | chr22:17780801-17780561 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 213, 23 |
| Conread position: | 66-332 |
| Cow position: | chr22:7301910-7301665 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 218, 39 |
| Conread position: | 66-339 |
| Cow position: | chr22:139379-139129 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 66-346 |
| Cow position: | chr22:27224049-27224317 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 211, 59 |
| Conread position: | 66-347 |
| Cow position: | chr22:11778687-11778421 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 215, 52 |
| Conread position: | 67-348 |
| Cow position: | chr22:42612381-42612654 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 69-319 |
| Cow position: | chr22:44924134-44923894 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 80-323 |
| Cow position: | chr22:25714940-25715172 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 201, 41 |
| Conread position: | 88-301 |
| Cow position: | chr22:31512875-31512658 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 149-300 |
| Cow position: | chr22:23270353-23270202 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 26 |
| Conread position: | 154-321 |
| Cow position: | chr22:1081786-1081954 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 170-342 |
| Cow position: | chr22:45291334-45291508 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 171-344 |
| Cow position: | chr22:19223768-19223935 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 173-323 |
| Cow position: | chr22:32690423-32690273 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 173-326 |
| Cow position: | chr22:17074386-17074539 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 174-320 |
| Cow position: | chr22:37554496-37554352 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 174-325 |
| Cow position: | chr22:25168272-25168124 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 174-327 |
| Cow position: | chr22:22999611-22999763 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 174-332 |
| Cow position: | chr22:15424153-15424311 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 174-332 |
| Cow position: | chr22:17184669-17184509 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 174-333 |
| Cow position: | chr22:42946031-42945876 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 174-342 |
| Cow position: | chr22:43873074-43873245 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 174-351 |
| Cow position: | chr22:8397811-8397631 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 175-332 |
| Cow position: | chr22:28685345-28685502 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 175-337 |
| Cow position: | chr22:7287528-7287697 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 176-355 |
| Cow position: | chr22:27468925-27469105 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 179-311 |
| Cow position: | chr22:39983174-39983041 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 179-337 |
| Cow position: | chr22:19069111-19069269 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 179-341 |
| Cow position: | chr22:23751158-23750997 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 182-325 |
| Cow position: | chr22:31192551-31192408 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 182-331 |
| Cow position: | chr22:33066982-33067132 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 182-364 |
| Cow position: | chr22:32053399-32053581 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 196-347 |
| Cow position: | chr22:33763443-33763290 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 24 |
Show alignments to all cow chromosomes.