Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 23-332 |
| Cow position: | chr24:32158434-32158120 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 24-310 |
| Cow position: | chr24:25677876-25678157 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 48-332 |
| Cow position: | chr24:28045635-28045906 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 50-339 |
| Cow position: | chr24:6507883-6507609 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 59-347 |
| Cow position: | chr24:31378649-31378921 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 62-349 |
| Cow position: | chr24:19754470-19754753 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 66-322 |
| Cow position: | chr24:26455742-26455986 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 66-325 |
| Cow position: | chr24:23824522-23824285 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 66-325 |
| Cow position: | chr24:27054310-27054555 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 66-325 |
| Cow position: | chr24:34369105-34368859 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 215, 49 |
| Conread position: | 66-336 |
| Cow position: | chr24:1438371-1438113 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 66-339 |
| Cow position: | chr24:14746536-14746812 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 66-339 |
| Cow position: | chr24:39350316-39350060 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 68-321 |
| Cow position: | chr24:14617559-14617801 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 69-319 |
| Cow position: | chr24:25164938-25165177 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 215, 58 |
| Conread position: | 70-320 |
| Cow position: | chr24:5849489-5849233 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 148 |
| Conread position: | 82-321 |
| Cow position: | chr24:22888507-22888735 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 123-348 |
| Cow position: | chr24:41482938-41483163 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 152-325 |
| Cow position: | chr24:41332612-41332435 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 174-293 |
| Cow position: | chr24:39474407-39474287 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 90 |
| Conread position: | 174-314 |
| Cow position: | chr24:23176701-23176563 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 174-325 |
| Cow position: | chr24:2143746-2143897 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 46 |
| Conread position: | 174-325 |
| Cow position: | chr24:38291856-38292003 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 174-328 |
| Cow position: | chr24:28349572-28349734 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 174-332 |
| Cow position: | chr24:6427701-6427858 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 130 |
| Conread position: | 174-332 |
| Cow position: | chr24:28279621-28279778 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 174-334 |
| Cow position: | chr24:4785678-4785515 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 174-339 |
| Cow position: | chr24:42943124-42942954 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 174-342 |
| Cow position: | chr24:39742811-39742981 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 175-332 |
| Cow position: | chr24:16055514-16055354 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 182-321 |
| Cow position: | chr24:44929353-44929493 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 182-342 |
| Cow position: | chr24:42916377-42916224 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 193-325 |
| Cow position: | chr24:15909635-15909769 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 195-345 |
| Cow position: | chr24:6246372-6246215 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 89, 25 |
Show alignments to all cow chromosomes.