Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 43-311 |
| Cow position: | chr25:8080625-8080882 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 52-341 |
| Cow position: | chr25:14075212-14075489 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 54-321 |
| Cow position: | chr25:13560301-13560048 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 59-325 |
| Cow position: | chr25:40957071-40956817 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 8, 97 |
| Conread position: | 63-325 |
| Cow position: | chr25:8576607-8576863 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 66-298 |
| Cow position: | chr25:34379184-34378962 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 66-302 |
| Cow position: | chr25:14570296-14570519 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 66-318 |
| Cow position: | chr25:13562360-13562595 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 66-325 |
| Cow position: | chr25:27534995-27534749 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 66-325 |
| Cow position: | chr25:33205156-33204915 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 66-384 |
| Cow position: | chr25:26457756-26457450 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 215, 57 |
| Conread position: | 67-332 |
| Cow position: | chr25:18000604-18000354 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 214, 37 |
| Conread position: | 68-326 |
| Cow position: | chr25:26240464-26240710 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 216, 71 |
| Conread position: | 68-332 |
| Cow position: | chr25:24405809-24405556 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 214, 75 |
| Conread position: | 68-333 |
| Cow position: | chr25:31732409-31732136 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 68-378 |
| Cow position: | chr25:34970390-34970672 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 71 |
| Conread position: | 70-332 |
| Cow position: | chr25:36501308-36501064 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 215, 52 |
| Conread position: | 97-326 |
| Cow position: | chr25:6177987-6178205 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 187, 48 |
| Conread position: | 151-339 |
| Cow position: | chr25:20614721-20614909 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 152-323 |
| Cow position: | chr25:9109335-9109507 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 152-334 |
| Cow position: | chr25:18810856-18811039 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 156-320 |
| Cow position: | chr25:20885084-20884923 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 169-325 |
| Cow position: | chr25:20428333-20428488 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 169-372 |
| Cow position: | chr25:4716270-4716473 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 170-344 |
| Cow position: | chr25:18239523-18239703 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 174-297 |
| Cow position: | chr25:10748482-10748358 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 174-325 |
| Cow position: | chr25:17701975-17701822 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 31 |
| Conread position: | 174-326 |
| Cow position: | chr25:5365547-5365703 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 135 |
| Conread position: | 174-332 |
| Cow position: | chr25:41094117-41093958 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 174-342 |
| Cow position: | chr25:12932644-12932815 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 110, 90 |
| Conread position: | 174-342 |
| Cow position: | chr25:23248722-23248554 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 174-348 |
| Cow position: | chr25:18448831-18449002 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 182-288 |
| Cow position: | chr25:395852-395959 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 182-326 |
| Cow position: | chr25:18228204-18228347 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 185-332 |
| Cow position: | chr25:11040968-11041110 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 33 |
Show alignments to all cow chromosomes.