Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 18-302 |
| Cow position: | chr27:21681237-21681518 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 23-325 |
| Cow position: | chr27:21578508-21578791 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 24-325 |
| Cow position: | chr27:24341992-24341686 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 36-319 |
| Cow position: | chr27:6160043-6159777 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 43-342 |
| Cow position: | chr27:6454263-6453975 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 52-325 |
| Cow position: | chr27:13005885-13005633 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 56-342 |
| Cow position: | chr27:19601419-19601142 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 222, 24 |
| Conread position: | 65-325 |
| Cow position: | chr27:14937396-14937645 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 66-325 |
| Cow position: | chr27:19083684-19083933 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 215, 91 |
| Conread position: | 66-329 |
| Cow position: | chr27:24224862-24225115 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 66-333 |
| Cow position: | chr27:1536687-1536954 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 66-334 |
| Cow position: | chr27:29038909-29039167 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 216, 79 |
| Conread position: | 66-340 |
| Cow position: | chr27:8430408-8430673 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 66-346 |
| Cow position: | chr27:12244095-12244364 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 218, 61 |
| Conread position: | 67-302 |
| Cow position: | chr27:25998732-25998508 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 214, 32 |
| Conread position: | 67-325 |
| Cow position: | chr27:27049879-27050121 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 140-343 |
| Cow position: | chr27:16525865-16526075 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 158-334 |
| Cow position: | chr27:1675105-1674922 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 163-332 |
| Cow position: | chr27:26441103-26441271 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 169-340 |
| Cow position: | chr27:11746529-11746358 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 49 |
| Conread position: | 170-325 |
| Cow position: | chr27:13958404-13958559 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 48 |
| Conread position: | 174-275 |
| Cow position: | chr27:22781983-22781883 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 174-303 |
| Cow position: | chr27:6883970-6883842 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 174-325 |
| Cow position: | chr27:25880037-25879886 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 174-344 |
| Cow position: | chr27:24509755-24509591 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 175-321 |
| Cow position: | chr27:17875207-17875354 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 176-344 |
| Cow position: | chr27:30365252-30365080 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 179-300 |
| Cow position: | chr27:21991462-21991340 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 180-323 |
| Cow position: | chr27:1899642-1899785 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 182-280 |
| Cow position: | chr27:18219325-18219228 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 182-323 |
| Cow position: | chr27:25982792-25982932 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 182-332 |
| Cow position: | chr27:23662665-23662816 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 182-357 |
| Cow position: | chr27:24333689-24333866 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 8 |
| Conread position: | 186-329 |
| Cow position: | chr27:6037095-6036950 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.