Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 2-353 |
| Cow position: | chr28:9822130-9821770 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 23-243 |
| Cow position: | chr28:4098710-4098924 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 23-253 |
| Cow position: | chr28:2814632-2814405 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 38-325 |
| Cow position: | chr28:4274935-4274668 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 43-326 |
| Cow position: | chr28:5475121-5474854 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 43-333 |
| Cow position: | chr28:33285206-33284924 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 45-325 |
| Cow position: | chr28:12999009-12999271 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 226, 7 |
| Conread position: | 56-323 |
| Cow position: | chr28:15677810-15678062 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 225, 56 |
| Conread position: | 62-311 |
| Cow position: | chr28:3769741-3769507 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 65-296 |
| Cow position: | chr28:11007121-11007349 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 66-276 |
| Cow position: | chr28:12046985-12046786 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 66-322 |
| Cow position: | chr28:20963600-20963354 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 66-325 |
| Cow position: | chr28:6643352-6643103 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 66-331 |
| Cow position: | chr28:2517881-2517635 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 66-342 |
| Cow position: | chr28:4763807-4764073 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 66-343 |
| Cow position: | chr28:31166054-31165787 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 66-346 |
| Cow position: | chr28:1202309-1202045 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 219, 26 |
| Conread position: | 66-353 |
| Cow position: | chr28:15081992-15081718 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 67-325 |
| Cow position: | chr28:7540227-7539981 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 217, 87 |
| Conread position: | 82-314 |
| Cow position: | chr28:20275074-20275294 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 83-325 |
| Cow position: | chr28:11181216-11180988 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 187, 48 |
| Conread position: | 94-302 |
| Cow position: | chr28:8335919-8336116 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 160-302 |
| Cow position: | chr28:22331070-22331211 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 19 |
| Conread position: | 169-333 |
| Cow position: | chr28:18934474-18934641 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 170-307 |
| Cow position: | chr28:25340294-25340429 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 173-301 |
| Cow position: | chr28:28640885-28641009 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 174-325 |
| Cow position: | chr28:17362577-17362424 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 175-325 |
| Cow position: | chr28:23703434-23703583 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 175-345 |
| Cow position: | chr28:9294467-9294295 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 176-342 |
| Cow position: | chr28:14508344-14508172 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 177-356 |
| Cow position: | chr28:5979951-5980125 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 179-276 |
| Cow position: | chr28:22421955-22421859 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 179-325 |
| Cow position: | chr28:3940166-3940015 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 179-338 |
| Cow position: | chr28:34749765-34749926 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 181-339 |
| Cow position: | chr28:17625140-17624979 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 182-333 |
| Cow position: | chr28:3823106-3822956 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 193-333 |
| Cow position: | chr28:28513526-28513668 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.