Cow genome map


           Conread name:
           Thy1-THY010099F01
        

               Conread position:
               1-764
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 124
               

               Conread position:
               5-342
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               6-323
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               23-317
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               23-325
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               43-332
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               44-311
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 126
               

               Conread position:
               46-322
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               59-341
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               59-342
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               62-324
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               200, 56
               

               Conread position:
               65-340
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               65-342
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               65-353
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               66-247
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               66-277
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               66-300
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               215, 49
               

               Conread position:
               66-302
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               66-323
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               66-323
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               66-325
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               218, 77
               

               Conread position:
               66-330
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               215, 55
               

               Conread position:
               66-332
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               66-332
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               66-332
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               66-333
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               66-335
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               225, 88
               

               Conread position:
               66-342
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               225, 34
               

               Conread position:
               66-342
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               68-325
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 87
               

               Conread position:
               80-341
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               201, 74
               

               Conread position:
               88-325
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               135-352
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               154-332
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               168-320
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 69
               

               Conread position:
               169-332
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               170-332
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               170-332
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               171-332
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               173-325
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               174-332
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-332
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               174-342
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               174-353
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-354
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               175-325
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               175-325
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               175-332
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               176-342
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 114
               

               Conread position:
               179-332
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               179-338
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               182-332
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               182-338
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               182-342
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               182-342
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               183-325
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               101, 34
               

               Conread position:
               183-342
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               185-348
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               186-322
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 121
               

               Conread position:
               188-333
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               190-332
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 30
               
Show alignments to all cow chromosomes.