Cow genome map
| Conread name: | Thy1-THY010099F01 |
| Conread position: | 3-295 |
| Cow position: | chr7:33772524-33772800 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 6-325 |
| Cow position: | chr7:24667280-24667599 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 18-344 |
| Cow position: | chr7:59245866-59246188 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 23-323 |
| Cow position: | chr7:12755240-12754943 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 23-333 |
| Cow position: | chr7:11872690-11872375 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 23-377 |
| Cow position: | chr7:7096138-7095778 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 30-295 |
| Cow position: | chr7:23256924-23256670 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 38-345 |
| Cow position: | chr7:20918413-20918110 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 43-314 |
| Cow position: | chr7:25445339-25445599 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 49-347 |
| Cow position: | chr7:19399729-19399448 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 59-339 |
| Cow position: | chr7:26195841-26195576 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 63-323 |
| Cow position: | chr7:43234476-43234232 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 218, 47 |
| Conread position: | 66-285 |
| Cow position: | chr7:23177504-23177711 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 66-301 |
| Cow position: | chr7:45955895-45956120 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 66-302 |
| Cow position: | chr7:22981304-22981529 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 218, 60 |
| Conread position: | 66-322 |
| Cow position: | chr7:67761347-67761600 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 66-323 |
| Cow position: | chr7:8074134-8073889 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 218, 48 |
| Conread position: | 66-325 |
| Cow position: | chr7:10099393-10099146 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 66-349 |
| Cow position: | chr7:19881076-19880801 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 67-280 |
| Cow position: | chr7:47771541-47771735 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 67-317 |
| Cow position: | chr7:51632872-51633104 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 59 |
| Conread position: | 67-332 |
| Cow position: | chr7:27388009-27387756 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 67-340 |
| Cow position: | chr7:67839310-67839574 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 69-342 |
| Cow position: | chr7:24740869-24740610 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 235, 52 |
| Conread position: | 71-302 |
| Cow position: | chr7:1350384-1350165 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 210, 71 |
| Conread position: | 71-338 |
| Cow position: | chr7:25104339-25104599 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 71-340 |
| Cow position: | chr7:4512841-4512591 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 77-325 |
| Cow position: | chr7:12424522-12424761 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 82-333 |
| Cow position: | chr7:20109007-20108772 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 151-301 |
| Cow position: | chr7:61681599-61681444 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 151-323 |
| Cow position: | chr7:20081035-20080862 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 140, 20 |
| Conread position: | 169-307 |
| Cow position: | chr7:59713774-59713913 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 112, 51 |
| Conread position: | 170-325 |
| Cow position: | chr7:20467-20623 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 170-326 |
| Cow position: | chr7:45748978-45748824 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 170-332 |
| Cow position: | chr7:13587240-13587402 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 174-302 |
| Cow position: | chr7:57311678-57311808 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 174-325 |
| Cow position: | chr7:51086218-51086371 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 174-332 |
| Cow position: | chr7:37444927-37445086 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 175-332 |
| Cow position: | chr7:24521318-24521471 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 176-306 |
| Cow position: | chr7:34027832-34027961 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 106, 42 |
| Conread position: | 176-340 |
| Cow position: | chr7:62610355-62610520 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 176-345 |
| Cow position: | chr7:57577243-57577069 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 166 |
| Conread position: | 182-332 |
| Cow position: | chr7:53005419-53005569 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 182-340 |
| Cow position: | chr7:41728014-41728172 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 182-342 |
| Cow position: | chr7:39603392-39603552 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 186-325 |
| Cow position: | chr7:66206664-66206804 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 193-348 |
| Cow position: | chr7:5220932-5221090 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 37 |
Show alignments to all cow chromosomes.