Cow genome map

Conread name: Thy1-THY010099F01

Conread position: 2-302
Cow position: chrX:41733327-41733021 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 114

Conread position: 6-345
Cow position: chrX:7425340-7425688 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 34

Conread position: 23-345
Cow position: chrX:6203448-6203758 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 16

Conread position: 24-325
Cow position: chrX:18287169-18286883 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 15

Conread position: 44-341
Cow position: chrX:25713723-25714013 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 47

Conread position: 49-306
Cow position: chrX:2300858-2301106 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 86

Conread position: 63-322
Cow position: chrX:18142505-18142263 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 62, 74

Conread position: 63-342
Cow position: chrX:36840820-36841078 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 69

Conread position: 66-257
Cow position: chrX:13323044-13322860 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 66-280
Cow position: chrX:7497193-7497390 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 94

Conread position: 66-302
Cow position: chrX:32310056-32310284 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 16

Conread position: 66-302
Cow position: chrX:43426245-43426472 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 61

Conread position: 66-310
Cow position: chrX:630355-630123 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 212, 49

Conread position: 66-321
Cow position: chrX:29408072-29407828 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 66

Conread position: 66-332
Cow position: chrX:21664769-21664518 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 94

Conread position: 66-332
Cow position: chrX:25338138-25338391 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 61

Conread position: 66-332
Cow position: chrX:32431574-32431826 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 89

Conread position: 66-336
Cow position: chrX:20376921-20377174 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 55, 78

Conread position: 66-339
Cow position: chrX:2786605-2786348 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 71

Conread position: 67-323
Cow position: chrX:27771621-27771380 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 69

Conread position: 68-325
Cow position: chrX:36009957-36009716 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 215, 50

Conread position: 69-302
Cow position: chrX:17630850-17630624 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 75

Conread position: 70-325
Cow position: chrX:42011236-42011481 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 214, 82

Conread position: 71-330
Cow position: chrX:6041254-6041009 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 74

Conread position: 76-314
Cow position: chrX:35759976-35759747 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 70

Conread position: 84-297
Cow position: chrX:27176345-27176142 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 53

Conread position: 168-345
Cow position: chrX:29056330-29056508 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 31

Conread position: 169-311
Cow position: chrX:10289584-10289444 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 49

Conread position: 170-311
Cow position: chrX:12304604-12304746 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 170-325
Cow position: chrX:17964479-17964326 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 135

Conread position: 171-303
Cow position: chrX:3951084-3951218 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 48

Conread position: 173-376
Cow position: chrX:46028715-46028515 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 106, 45

Conread position: 174-307
Cow position: chrX:17042730-17042864 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 43

Conread position: 174-321
Cow position: chrX:29761637-29761488 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 174-329
Cow position: chrX:16291972-16291814 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 41

Conread position: 174-332
Cow position: chrX:41083962-41084123 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 174-339
Cow position: chrX:28835715-28835543 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 138

Conread position: 174-343
Cow position: chrX:29874323-29874157 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 44

Conread position: 174-355
Cow position: chrX:39339058-39338878 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 131

Conread position: 175-324
Cow position: chrX:23179231-23179083 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 43

Conread position: 176-313
Cow position: chrX:46146224-46146088 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 13

Conread position: 179-323
Cow position: chrX:488731-488873 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 39

Conread position: 181-325
Cow position: chrX:30483955-30483810 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 114

Conread position: 182-325
Cow position: chrX:17952920-17952776 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 36

Conread position: 182-339
Cow position: chrX:26619062-26618901 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 38

Conread position: 183-341
Cow position: chrX:37186218-37186373 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 40

Conread position: 189-342
Cow position: chrX:29675561-29675718 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 28

Show alignments to all cow chromosomes.