Cow genome map
Conread name: | Thy1-THY010099F01 |
Conread position: | 2-302 |
Cow position: | chrX:41733327-41733021 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 214 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 22, 114 |
Conread position: | 6-345 |
Cow position: | chrX:7425340-7425688 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 229 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 23-345 |
Cow position: | chrX:6203448-6203758 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 237 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 24-325 |
Cow position: | chrX:18287169-18286883 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 219 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 42, 15 |
Conread position: | 44-341 |
Cow position: | chrX:25713723-25714013 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 214 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 9, 47 |
Conread position: | 49-306 |
Cow position: | chrX:2300858-2301106 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 191 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 18, 86 |
Conread position: | 63-322 |
Cow position: | chrX:18142505-18142263 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 187 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 62, 74 |
Conread position: | 63-342 |
Cow position: | chrX:36840820-36841078 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 196 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 51, 69 |
Conread position: | 66-257 |
Cow position: | chrX:13323044-13322860 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 66-280 |
Cow position: | chrX:7497193-7497390 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 166 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 51, 94 |
Conread position: | 66-302 |
Cow position: | chrX:32310056-32310284 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 169 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 63, 16 |
Conread position: | 66-302 |
Cow position: | chrX:43426245-43426472 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 48, 61 |
Conread position: | 66-310 |
Cow position: | chrX:630355-630123 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 212, 49 |
Conread position: | 66-321 |
Cow position: | chrX:29408072-29407828 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 50, 66 |
Conread position: | 66-332 |
Cow position: | chrX:21664769-21664518 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 57, 94 |
Conread position: | 66-332 |
Cow position: | chrX:25338138-25338391 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 186 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 48, 61 |
Conread position: | 66-332 |
Cow position: | chrX:32431574-32431826 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 56, 89 |
Conread position: | 66-336 |
Cow position: | chrX:20376921-20377174 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 202 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 55, 78 |
Conread position: | 66-339 |
Cow position: | chrX:2786605-2786348 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 194 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 67-323 |
Cow position: | chrX:27771621-27771380 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 189 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 56, 69 |
Conread position: | 68-325 |
Cow position: | chrX:36009957-36009716 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 191 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 215, 50 |
Conread position: | 69-302 |
Cow position: | chrX:17630850-17630624 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 45, 75 |
Conread position: | 70-325 |
Cow position: | chrX:42011236-42011481 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 184 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 214, 82 |
Conread position: | 71-330 |
Cow position: | chrX:6041254-6041009 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 182 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 43, 74 |
Conread position: | 76-314 |
Cow position: | chrX:35759976-35759747 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 38, 70 |
Conread position: | 84-297 |
Cow position: | chrX:27176345-27176142 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 28, 53 |
Conread position: | 168-345 |
Cow position: | chrX:29056330-29056508 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 20, 31 |
Conread position: | 169-311 |
Cow position: | chrX:10289584-10289444 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 109, 49 |
Conread position: | 170-311 |
Cow position: | chrX:12304604-12304746 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 170-325 |
Cow position: | chrX:17964479-17964326 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 128 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 99, 135 |
Conread position: | 171-303 |
Cow position: | chrX:3951084-3951218 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 5, 48 |
Conread position: | 173-376 |
Cow position: | chrX:46028715-46028515 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 106, 45 |
Conread position: | 174-307 |
Cow position: | chrX:17042730-17042864 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 107, 43 |
Conread position: | 174-321 |
Cow position: | chrX:29761637-29761488 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 174-329 |
Cow position: | chrX:16291972-16291814 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 107, 41 |
Conread position: | 174-332 |
Cow position: | chrX:41083962-41084123 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 174-339 |
Cow position: | chrX:28835715-28835543 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 46, 138 |
Conread position: | 174-343 |
Cow position: | chrX:29874323-29874157 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 105, 44 |
Conread position: | 174-355 |
Cow position: | chrX:39339058-39338878 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 91, 131 |
Conread position: | 175-324 |
Cow position: | chrX:23179231-23179083 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 122, 43 |
Conread position: | 176-313 |
Cow position: | chrX:46146224-46146088 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 115 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 105, 13 |
Conread position: | 179-323 |
Cow position: | chrX:488731-488873 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 102, 39 |
Conread position: | 181-325 |
Cow position: | chrX:30483955-30483810 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 97, 114 |
Conread position: | 182-325 |
Cow position: | chrX:17952920-17952776 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 96, 36 |
Conread position: | 182-339 |
Cow position: | chrX:26619062-26618901 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 100, 38 |
Conread position: | 183-341 |
Cow position: | chrX:37186218-37186373 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 108, 40 |
Conread position: | 189-342 |
Cow position: | chrX:29675561-29675718 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 76, 28 |
Show alignments to all cow chromosomes.