Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 45-473
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 28

Conread position: 83-473
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 90

Conread position: 88-430
Cow position:
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 224

Conread position: 88-473
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 123

Conread position: 88-473
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 6

Conread position: 88-473
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 76

Conread position: 89-273
Cow position:
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 89-280
Cow position:
Alignm length: 192
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 89-309
Cow position:
Alignm length: 221
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 89-309
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 175

Conread position: 89-320
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 173, 85

Conread position: 89-321
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 89-337
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 105

Conread position: 89-340
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 89-343
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 92

Conread position: 89-345
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 167, 12

Conread position: 89-347
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 74, 88

Conread position: 89-347
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 89-347
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 92

Conread position: 89-347
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 163

Conread position: 89-360
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 89-366
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 90

Conread position: 89-367
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 195, 85

Conread position: 89-372
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 182, 77

Conread position: 89-381
Cow position:
Alignm length: 294
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 96, 61

Conread position: 89-386
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 34

Conread position: 89-387
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 62

Conread position: 89-387
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 74

Conread position: 89-397
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 89-398
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 173

Conread position: 89-405
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 75, 168

Conread position: 89-406
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 302, 77

Conread position: 89-409
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 77, 0

Conread position: 89-412
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 88

Conread position: 89-412
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 84

Conread position: 89-414
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 74, 88

Conread position: 89-416
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 62, 100

Conread position: 89-417
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 201

Conread position: 89-421
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 95, 75

Conread position: 89-434
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 102

Conread position: 89-440
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 89-459
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-461
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 89-469
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 89-469
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 89-473
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 90

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 89-473
Cow position:
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 120

Conread position: 89-473
Cow position:
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 17

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 16

Conread position: 91-345
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 88

Conread position: 91-377
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 91-473
Cow position:
Alignm length: 398
Alignm identity: 278
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 73

Conread position: 92-302
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 92-321
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 227, 74

Conread position: 92-322
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 14

Conread position: 92-341
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 14

Conread position: 92-414
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 72

Conread position: 92-472
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 169

Conread position: 92-473
Cow position:
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 75

Conread position: 92-473
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 92-473
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 327, 81

Conread position: 92-473
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 99

Conread position: 92-473
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 73

Conread position: 94-473
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 38

Conread position: 95-313
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 95-346
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 66

Conread position: 95-386
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 95-388
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 95-404
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 290, 72

Conread position: 95-417
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 30

Conread position: 95-422
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 26

Conread position: 95-473
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 123

Conread position: 95-473
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 96-319
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 97-416
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 163

Conread position: 97-473
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 106

Conread position: 97-473
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 98-417
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 99-473
Cow position:
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 101-336
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 90

Conread position: 106-429
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 72

Conread position: 107-469
Cow position:
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 81

Conread position: 107-472
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 77

Conread position: 112-341
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 112-446
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 115-371
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 144, 51

Conread position: 115-414
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 63

Conread position: 115-416
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 71

Conread position: 115-417
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 140

Conread position: 115-473
Cow position:
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 78

Conread position: 116-473
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 61

Conread position: 117-446
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 130-420
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 68

Conread position: 163-473
Cow position:
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 164-399
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 164-473
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 177-434
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 6

Conread position: 178-454
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 178-473
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 8

Conread position: 178-473
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 184-469
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 226, 74

Conread position: 186-346
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 187-473
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 60

Conread position: 195-473
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 46

Conread position: 217-409
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 217-473
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 130

Conread position: 217-473
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 64, 30

Conread position: 224-473
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 247-386
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 247-387
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 247-469
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 247-469
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 36

Conread position: 247-491
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 79, 101

Show alignments to all cow chromosomes.