Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 42-473
Cow position:
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 52

Conread position: 84-380
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 173, 74

Conread position: 84-473
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 92

Conread position: 86-313
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 77

Conread position: 88-317
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 88-323
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 22

Conread position: 88-381
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 87

Conread position: 88-444
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 88-469
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 164

Conread position: 89-281
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 89-300
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 89-306
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 74

Conread position: 89-308
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 88

Conread position: 89-323
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 89-338
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 89-341
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 108, 0

Conread position: 89-346
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 32

Conread position: 89-346
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 89-347
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 89-365
Cow position:
Alignm length: 279
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 89

Conread position: 89-366
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 142, 74

Conread position: 89-386
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 71

Conread position: 89-387
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 146

Conread position: 89-406
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 89-411
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 21

Conread position: 89-414
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 174

Conread position: 89-416
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 89

Conread position: 89-417
Cow position:
Alignm length: 350
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 177, 84

Conread position: 89-417
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 17

Conread position: 89-417
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 89-417
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 74

Conread position: 89-422
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 90

Conread position: 89-431
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 71

Conread position: 89-435
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 76

Conread position: 89-445
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 72

Conread position: 89-446
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 300, 98

Conread position: 89-446
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 89-446
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 89-447
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 89-468
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 262

Conread position: 89-469
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 87

Conread position: 89-472
Cow position:
Alignm length: 399
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 74, 86

Conread position: 89-473
Cow position:
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 75

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 77

Conread position: 89-473
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 96

Conread position: 89-473
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 107

Conread position: 89-473
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 19

Conread position: 89-473
Cow position:
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 137

Conread position: 89-473
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 96

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 90-347
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 87

Conread position: 90-385
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 37

Conread position: 90-473
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 86

Conread position: 90-473
Cow position:
Alignm length: 386
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 91-393
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 23

Conread position: 91-415
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 173

Conread position: 91-473
Cow position:
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 75

Conread position: 92-322
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 40

Conread position: 92-393
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 170, 81

Conread position: 92-406
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 170

Conread position: 92-412
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 92-417
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 232

Conread position: 92-417
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 142

Conread position: 92-422
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 72

Conread position: 92-431
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 92-434
Cow position:
Alignm length: 347
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 113

Conread position: 92-469
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 92-473
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 82

Conread position: 92-473
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 74

Conread position: 95-306
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 135

Conread position: 95-365
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 95-398
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 79

Conread position: 95-403
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 15

Conread position: 95-438
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 291, 58

Conread position: 95-443
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 71

Conread position: 95-463
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 45

Conread position: 95-473
Cow position:
Alignm length: 395
Alignm identity: 267
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 71

Conread position: 95-473
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 192

Conread position: 95-473
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 82

Conread position: 95-473
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 288, 11

Conread position: 96-309
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 80

Conread position: 96-463
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 96-473
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 78

Conread position: 97-309
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 97-393
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 86

Conread position: 97-401
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 79, 0

Conread position: 99-473
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 76

Conread position: 106-348
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 107-473
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 57

Conread position: 112-467
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 115, 208

Conread position: 112-469
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 112-473
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 52, 148

Conread position: 113-485
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 115-473
Cow position:
Alignm length: 366
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 105

Conread position: 123-473
Cow position:
Alignm length: 352
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 9

Conread position: 128-417
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 134-432
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 51

Conread position: 135-336
Cow position:
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 130

Conread position: 135-417
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 31

Conread position: 136-473
Cow position:
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 143-417
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 23

Conread position: 160-473
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 162-469
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 183-446
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 66

Conread position: 188-383
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 68

Conread position: 188-416
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 222, 45

Conread position: 190-445
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 190-473
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 216, 59

Conread position: 195-444
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 196-472
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 217-454
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 183, 81

Show alignments to all cow chromosomes.