Cow genome map
| Conread name: | Thy1-THY010121F06 |
| Conread position: | 42-473 |
| Cow position: | chr11:17860074-17860494 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 84-380 |
| Cow position: | chr11:30638910-30639196 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 173, 74 |
| Conread position: | 84-473 |
| Cow position: | chr11:10076808-10076434 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 92 |
| Conread position: | 86-313 |
| Cow position: | chr11:3920266-3920490 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 77 |
| Conread position: | 88-317 |
| Cow position: | chr11:7497611-7497833 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 88-323 |
| Cow position: | chr11:1157679-1157449 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 88-381 |
| Cow position: | chr11:2084179-2083899 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 78, 87 |
| Conread position: | 88-444 |
| Cow position: | chr11:6835569-6835219 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 88-469 |
| Cow position: | chr11:29916577-29916211 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 164 |
| Conread position: | 89-281 |
| Cow position: | chr11:32254182-32254371 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 89-300 |
| Cow position: | chr11:16907016-16907214 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 89-306 |
| Cow position: | chr11:71501097-71501312 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 177, 74 |
| Conread position: | 89-308 |
| Cow position: | chr11:37804519-37804734 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 89-323 |
| Cow position: | chr11:13592770-13592542 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 89-338 |
| Cow position: | chr11:49231908-49231667 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 89-341 |
| Cow position: | chr11:61958709-61958959 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 89-346 |
| Cow position: | chr11:19593852-19593604 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 89-346 |
| Cow position: | chr11:38874367-38874617 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 89-347 |
| Cow position: | chr11:61246424-61246673 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 89-365 |
| Cow position: | chr11:32436369-32436096 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 89 |
| Conread position: | 89-366 |
| Cow position: | chr11:36114191-36113923 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 142, 74 |
| Conread position: | 89-386 |
| Cow position: | chr11:45872276-45872572 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 89-387 |
| Cow position: | chr11:66188282-66188576 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 89-406 |
| Cow position: | chr11:45631731-45632038 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 89-411 |
| Cow position: | chr11:32378222-32377909 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 89-414 |
| Cow position: | chr11:49934696-49935025 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 174 |
| Conread position: | 89-416 |
| Cow position: | chr11:6233845-6234162 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 77, 89 |
| Conread position: | 89-417 |
| Cow position: | chr11:40478818-40479156 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 177, 84 |
| Conread position: | 89-417 |
| Cow position: | chr11:43430422-43430731 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 89-417 |
| Cow position: | chr11:55333944-55333627 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 89-417 |
| Cow position: | chr11:67804784-67804466 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 74 |
| Conread position: | 89-422 |
| Cow position: | chr11:36981598-36981278 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 89-431 |
| Cow position: | chr11:14649279-14649611 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 89-435 |
| Cow position: | chr11:70273341-70273001 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 89-445 |
| Cow position: | chr11:18588551-18588892 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 72 |
| Conread position: | 89-446 |
| Cow position: | chr11:287301-287647 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 300, 98 |
| Conread position: | 89-446 |
| Cow position: | chr11:23232480-23232826 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 89-446 |
| Cow position: | chr11:36986984-36986649 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 89-447 |
| Cow position: | chr11:41986011-41986358 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 89-468 |
| Cow position: | chr11:15504147-15503766 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 262 |
| Conread position: | 89-469 |
| Cow position: | chr11:48041998-48042389 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 89-472 |
| Cow position: | chr11:38236286-38235898 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 89-473 |
| Cow position: | chr11:4732377-4731998 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 89-473 |
| Cow position: | chr11:17889696-17890063 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 77 |
| Conread position: | 89-473 |
| Cow position: | chr11:18371404-18371770 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 89-473 |
| Cow position: | chr11:20602262-20601899 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 107 |
| Conread position: | 89-473 |
| Cow position: | chr11:23251559-23251944 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 19 |
| Conread position: | 89-473 |
| Cow position: | chr11:30925191-30924805 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 137 |
| Conread position: | 89-473 |
| Cow position: | chr11:33349666-33350042 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 96 |
| Conread position: | 89-473 |
| Cow position: | chr11:53778651-53778276 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 89-473 |
| Cow position: | chr11:71168555-71168915 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 90-347 |
| Cow position: | chr11:39462657-39462402 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 90-385 |
| Cow position: | chr11:3726322-3726033 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 90-473 |
| Cow position: | chr11:58588380-58588003 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 86 |
| Conread position: | 90-473 |
| Cow position: | chr11:66896764-66897140 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 84 |
| Conread position: | 91-393 |
| Cow position: | chr11:30597026-30596736 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 91-415 |
| Cow position: | chr11:56654588-56654266 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 79, 173 |
| Conread position: | 91-473 |
| Cow position: | chr11:33293746-33294132 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 92-322 |
| Cow position: | chr11:20684540-20684770 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 92-393 |
| Cow position: | chr11:83397937-83397644 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 170, 81 |
| Conread position: | 92-406 |
| Cow position: | chr11:53773713-53773399 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 170 |
| Conread position: | 92-412 |
| Cow position: | chr11:21549512-21549216 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 92-417 |
| Cow position: | chr11:2788425-2788095 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 232 |
| Conread position: | 92-417 |
| Cow position: | chr11:22931939-22932246 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 142 |
| Conread position: | 92-422 |
| Cow position: | chr11:8988198-8988519 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 92-431 |
| Cow position: | chr11:85723729-85723403 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 92-434 |
| Cow position: | chr11:46747829-46748170 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 113 |
| Conread position: | 92-469 |
| Cow position: | chr11:7924557-7924921 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 92-473 |
| Cow position: | chr11:10095375-10095002 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 82 |
| Conread position: | 92-473 |
| Cow position: | chr11:80787875-80788251 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 95-306 |
| Cow position: | chr11:60143272-60143476 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 135 |
| Conread position: | 95-365 |
| Cow position: | chr11:33348158-33348417 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 95-398 |
| Cow position: | chr11:36799278-36799561 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 79 |
| Conread position: | 95-403 |
| Cow position: | chr11:19247171-19247466 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 95-438 |
| Cow position: | chr11:8147870-8148196 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 291, 58 |
| Conread position: | 95-443 |
| Cow position: | chr11:71868574-71868914 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 71 |
| Conread position: | 95-463 |
| Cow position: | chr11:13500044-13499684 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 95-473 |
| Cow position: | chr11:23128511-23128892 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 95-473 |
| Cow position: | chr11:27386310-27386680 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 192 |
| Conread position: | 95-473 |
| Cow position: | chr11:42359143-42358784 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 95-473 |
| Cow position: | chr11:49152977-49152600 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 288, 11 |
| Conread position: | 96-309 |
| Cow position: | chr11:83687406-83687608 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 80 |
| Conread position: | 96-463 |
| Cow position: | chr11:59902918-59902564 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 96-473 |
| Cow position: | chr11:64029235-64029596 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 97-309 |
| Cow position: | chr11:38670708-38670502 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 97-393 |
| Cow position: | chr11:171675-171957 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 97-401 |
| Cow position: | chr11:34032175-34032464 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 99-473 |
| Cow position: | chr11:2309898-2309532 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 106-348 |
| Cow position: | chr11:18373093-18372861 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 107-473 |
| Cow position: | chr11:1485858-1486209 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 57 |
| Conread position: | 112-467 |
| Cow position: | chr11:18066816-18067175 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 115, 208 |
| Conread position: | 112-469 |
| Cow position: | chr11:58990514-58990174 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 112-473 |
| Cow position: | chr11:75480008-75480375 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 113-485 |
| Cow position: | chr11:53130824-53130462 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 115-473 |
| Cow position: | chr11:53147524-53147880 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 123-473 |
| Cow position: | chr11:81605629-81605297 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 128-417 |
| Cow position: | chr11:35149156-35148884 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 134-432 |
| Cow position: | chr11:65857850-65857558 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 135, 51 |
| Conread position: | 135-336 |
| Cow position: | chr11:70600826-70601027 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 135-417 |
| Cow position: | chr11:9221737-9222010 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 136-473 |
| Cow position: | chr11:71846357-71846689 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 143-417 |
| Cow position: | chr11:40258429-40258682 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 118, 23 |
| Conread position: | 160-473 |
| Cow position: | chr11:34413061-34412759 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 162-469 |
| Cow position: | chr11:40467154-40467460 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 183-446 |
| Cow position: | chr11:50112132-50111878 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 188-383 |
| Cow position: | chr11:2832732-2832921 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 68 |
| Conread position: | 188-416 |
| Cow position: | chr11:63518949-63518730 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 222, 45 |
| Conread position: | 190-445 |
| Cow position: | chr11:35238770-35238516 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 190-473 |
| Cow position: | chr11:25337012-25336731 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 216, 59 |
| Conread position: | 195-444 |
| Cow position: | chr11:7315196-7315436 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 196-472 |
| Cow position: | chr11:8525181-8525442 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-454 |
| Cow position: | chr11:51756227-51755994 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 183, 81 |
Show alignments to all cow chromosomes.