Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               86-416
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               88-299
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               172, 95
               

               Conread position:
               88-312
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               88-359
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               88-478
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               319, 86
               

               Conread position:
               89-325
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               89-333
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 74
               

               Conread position:
               89-335
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               222, 76
               

               Conread position:
               89-346
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               76, 86
               

               Conread position:
               89-348
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               89-388
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               275, 76
               

               Conread position:
               89-414
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               89-414
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               89-416
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               89-416
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               258, 73
               

               Conread position:
               89-416
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               313, 77
               

               Conread position:
               89-428
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               89-446
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               89-454
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 77
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 262
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 121
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 76
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 105
               

               Conread position:
               92-341
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               92-347
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 167
               

               Conread position:
               92-405
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               92-406
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 74
               

               Conread position:
               92-428
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 74
               

               Conread position:
               92-441
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 91
               

               Conread position:
               92-469
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               93-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               95-343
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               95-347
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               95-378
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               95-416
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 172
               

               Conread position:
               96-319
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               96-370
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               96-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               98-388
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               98-453
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               99-340
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               81, 67
               

               Conread position:
               99-414
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               110, 54
               

               Conread position:
               112-366
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               113-466
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               114-473
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               115-416
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 145
               

               Conread position:
               117-428
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               117-472
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 55
               

               Conread position:
               117-473
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 47
               

               Conread position:
               142-345
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               115, 164
               

               Conread position:
               178-376
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               183-473
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               217-415
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               218-440
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               218-473
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               219-444
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               149, 97
               

               Conread position:
               248-468
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.