Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 86-328
Cow position: chr18:32430566-32430795 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 88-447
Cow position: chr18:52637509-52637862 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 86

Conread position: 89-264
Cow position: chr18:5632287-5632112 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 78

Conread position: 89-285
Cow position: chr18:50974275-50974467 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 89-309
Cow position: chr18:27109273-27109492 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 178, 0

Conread position: 89-350
Cow position: chr18:1954570-1954828 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 88

Conread position: 89-370
Cow position: chr18:4495867-4496139 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 89-381
Cow position: chr18:51643346-51643662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 89

Conread position: 89-383
Cow position: chr18:10322825-10322536 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 76, 0

Conread position: 89-403
Cow position: chr18:47525427-47525122 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 134

Conread position: 89-413
Cow position: chr18:21266525-21266214 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 89-429
Cow position: chr18:26355009-26355332 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 168, 85

Conread position: 89-464
Cow position: chr18:4182168-4182532 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 85

Conread position: 89-469
Cow position: chr18:40759226-40758866 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 89-472
Cow position: chr18:11867356-11867000 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 77

Conread position: 89-473
Cow position: chr18:3180430-3180066 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 75

Conread position: 89-473
Cow position: chr18:7965251-7964877 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 98

Conread position: 89-473
Cow position: chr18:14586451-14586830 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 77

Conread position: 89-473
Cow position: chr18:17005279-17004900 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 88

Conread position: 89-473
Cow position: chr18:19646194-19645824 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 76, 0

Conread position: 89-473
Cow position: chr18:20174110-20174484 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 83

Conread position: 89-473
Cow position: chr18:22120866-22121234 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 89-473
Cow position: chr18:28768385-28768013 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 106

Conread position: 89-473
Cow position: chr18:29371886-29371513 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 89

Conread position: 89-473
Cow position: chr18:39662798-39662423 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 77

Conread position: 89-473
Cow position: chr18:43283737-43284105 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 89-474
Cow position: chr18:37023531-37023911 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 90-473
Cow position: chr18:11377383-11377017 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 86

Conread position: 91-258
Cow position: chr18:22274820-22274983 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 92-301
Cow position: chr18:346482-346689 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 32

Conread position: 92-306
Cow position: chr18:36746243-36746447 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 137, 74

Conread position: 92-315
Cow position: chr18:7109146-7108924 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 205, 74

Conread position: 92-328
Cow position: chr18:3211894-3211658 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 175

Conread position: 92-414
Cow position: chr18:6609842-6610153 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 296, 72

Conread position: 92-468
Cow position: chr18:56159478-56159110 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 74

Conread position: 92-471
Cow position: chr18:31672496-31672855 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 58

Conread position: 92-473
Cow position: chr18:4927085-4926720 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 94-332
Cow position: chr18:54056564-54056344 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 95-292
Cow position: chr18:43555511-43555703 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 95-341
Cow position: chr18:2863977-2864222 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 224

Conread position: 95-371
Cow position: chr18:17649725-17649988 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 66

Conread position: 95-401
Cow position: chr18:51656029-51656335 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 164, 71

Conread position: 95-407
Cow position: chr18:36098225-36097913 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 173

Conread position: 95-469
Cow position: chr18:51691449-51691818 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 80

Conread position: 96-473
Cow position: chr18:52635058-52635435 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 230

Conread position: 99-421
Cow position: chr18:16726658-16726345 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 23

Conread position: 100-385
Cow position: chr18:2480664-2480376 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 156, 63

Conread position: 107-411
Cow position: chr18:20271018-20271312 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 58, 68

Conread position: 112-363
Cow position: chr18:12809851-12809615 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 112-366
Cow position: chr18:20481886-20482121 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 112-473
Cow position: chr18:7487246-7486898 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 61

Conread position: 112-473
Cow position: chr18:35636350-35636701 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 114-469
Cow position: chr18:10861435-10861766 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 142, 52

Conread position: 115-473
Cow position: chr18:39001810-39002149 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 51

Conread position: 117-415
Cow position: chr18:1144192-1144489 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 87

Conread position: 119-416
Cow position: chr18:52632418-52632702 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 190, 58

Conread position: 142-469
Cow position: chr18:26937687-26937377 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 267, 24

Conread position: 143-347
Cow position: chr18:55715882-55716077 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 144-444
Cow position: chr18:52382668-52382372 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 151

Conread position: 178-469
Cow position: chr18:20864922-20864637 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 195-388
Cow position: chr18:21773413-21773220 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 78

Conread position: 213-478
Cow position: chr18:21721379-21721639 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 226-431
Cow position: chr18:4625787-4625589 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 0

Conread position: 243-473
Cow position: chr18:7966130-7965917 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 247-469
Cow position: chr18:6877753-6877979 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 111

Conread position: 247-473
Cow position: chr18:46108509-46108732 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.