Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 86-473
Cow position:
Alignm length: 389
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 115

Conread position: 88-347
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 100

Conread position: 88-428
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 167

Conread position: 88-450
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 90

Conread position: 88-473
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 86

Conread position: 88-497
Cow position:
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 62

Conread position: 89-296
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 75

Conread position: 89-298
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 198, 77

Conread position: 89-312
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 71

Conread position: 89-312
Cow position:
Alignm length: 227
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 89

Conread position: 89-312
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 89-315
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 89-341
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 89-345
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 78

Conread position: 89-347
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 89-347
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 89-362
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 146, 75

Conread position: 89-366
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 78

Conread position: 89-371
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 85

Conread position: 89-377
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 194

Conread position: 89-382
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 164

Conread position: 89-382
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 188, 77

Conread position: 89-387
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 89-387
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 75, 175

Conread position: 89-388
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 76, 133

Conread position: 89-393
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 88

Conread position: 89-403
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 89-404
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 89-405
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 294, 51

Conread position: 89-405
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 67, 95

Conread position: 89-406
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 300, 75

Conread position: 89-410
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 98

Conread position: 89-410
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 291, 114

Conread position: 89-411
Cow position:
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-415
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 77, 171

Conread position: 89-416
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 89-417
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 89

Conread position: 89-417
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 0

Conread position: 89-423
Cow position:
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 77

Conread position: 89-428
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 98

Conread position: 89-435
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 141

Conread position: 89-469
Cow position:
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 75

Conread position: 89-469
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 105

Conread position: 89-469
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 92

Conread position: 89-472
Cow position:
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 76

Conread position: 89-472
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 89-473
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 101

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-473
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 61, 88

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 88

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 89-473
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 221

Conread position: 89-473
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 167

Conread position: 89-474
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 89-499
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 90-314
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 91-386
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 26

Conread position: 91-445
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 82

Conread position: 91-469
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 171

Conread position: 91-473
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 49

Conread position: 92-315
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 97

Conread position: 92-333
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 92-350
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 84

Conread position: 92-365
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 72

Conread position: 92-386
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 92-393
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 293, 72

Conread position: 92-411
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 92-468
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 92-473
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 70

Conread position: 92-473
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 86

Conread position: 92-473
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 95-344
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 167, 24

Conread position: 95-401
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 164, 82

Conread position: 95-473
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 72

Conread position: 95-473
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 95-473
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 70

Conread position: 95-473
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 95-484
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 114

Conread position: 96-416
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 44

Conread position: 96-473
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 99

Conread position: 100-410
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 144, 0

Conread position: 102-378
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 70

Conread position: 102-417
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 102-473
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 65

Conread position: 112-406
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 53

Conread position: 112-409
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 33

Conread position: 113-417
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 270, 60

Conread position: 113-417
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 53

Conread position: 115-463
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 115-472
Cow position:
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 115-473
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 152

Conread position: 115-473
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 113

Conread position: 124-469
Cow position:
Alignm length: 346
Alignm identity: 243
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 130-299
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 44

Conread position: 145-473
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 263, 17

Conread position: 160-428
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 14

Conread position: 177-406
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 177-406
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 177-473
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 177-484
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 178-365
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 82

Conread position: 181-460
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 0

Conread position: 182-408
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 183-472
Cow position:
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 187-473
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 190-473
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 224, 92

Conread position: 195-469
Cow position:
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 195-473
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 247-419
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 247-453
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 247-472
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 142, 68

Show alignments to all cow chromosomes.